| Factor type | LuxR/UhpA |
|---|---|
| SWISS-PROT | P11470 |
| SubtiList | BG10355 |
| Consensus seq. | RWWTRGGY--YY |
| Comment | Positive(?) regulator which affetcs transcription of many genes in the mother cell during the late stages of sporulation |
| Link to | Phylogenetic profile , Weight matrix & Motif alignment |
| Regulated gene |
Operon | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Exp. | Reference | Year |
|---|---|---|---|---|---|---|---|---|---|
| cgeA | cgeAB operon | SigK | Positive | 2147772..2147803 | -72:-41 | AATAGATGAAAAATAGATCAGGTACGGCGTTC |
HB | Roels S, et al. | 1995 |
| cgeA | cgeAB operon | SigK | Positive | 2147761..2147792 | -83:-52 | CATTTTCCTTAAATAGATGAAAAATAGATCAG |
HB | Roels S, et al. | 1995 |
| cgeA | cgeAB operon | SigK | Positive | 2147744..2147775 | -100:-69 | CTCCATTAAAAAATCAGCATTTTCCTTAAATA |
HB | Roels S, et al. | 1995 |
| cgeA | cgeAB operon | SigK | Positive | 2147718..2147749 | -126:-95 | TCGATTTATGGTATAGGCTATGTCCACTCCAT |
HB | Roels S, et al. | 1995 |
| cgeA | cgeAB operon | SigK | Positive | 2147696..2147727 | -148:-117 | CTGTTTCACAATATGTGCGACTTCGATTTATG |
HB | Roels S, et al. | 1995 |
| cgeC | cgeCDE | SigK | Positive | 2147791..2147822 | -126:-95 | CTGTTATTTGGTATGAGTCGAACGCCGTACCT |
HB | Roels S, et al. | 1995 |
| cotA | ND | SigK | Negative | ND | ND | ND |
DB RO | Zheng L, et al. | 1992 |
| cotB | ND | SigK | Positive | 3715010..3715029 | -81:-62 | GAAAATGGGTATTCGCGGAA |
GS FT RO | Zheng L, et al. | 1992 |
| cotB | ND | SigK | Positive | 3714989..3715009 | -71:-41 | AAAGCGACAATTAGGCTATTG |
RO GS FT | Zheng L, et al. | 1992 |
| cotC | ND | SigK | Positive | 1904556..1904571 | -141:-126 | CGTTTGGGCCGATGAA |
GS FT RO | Zheng L, et al. | 1992 |
| cotC | ND | SigK | Positive | 1904486..1904507 | -77:-56 | ATCATTTGGACAGCCCTTTTTT |
GS FT RO | Zheng L, et al. | 1992 |
| cotD | ND | SigK | Pos/Neg | 2332271..2332302 | -63:-32 | CACACTTTTAAAATAGGTCTTTGCATCAGAAC |
FT | Ichikawa H et al. | 1999 |
| cotD | ND | SigK | Pos/Neg | 2332249..2332280 | -10:-41 | GCATCAGAACATGTACCCCTTATTTTTCATAA |
FT | Ichikawa H et al. | 1999 |
| cotG | ND | SigK | Positive | 3716134..3716165 | -85:-54 | TCCTTACAAATTTTAGGCTTTTATTTTTATAA |
DB | Sacco M, et al. | 1995 |
| cotV | cotVWX | SigK | Positive | 1251385..1251406 | -53:-32 | AAATTGGTTATTTTTATTATTC |
FT RO | Zhang J, et al. | 1994 |
| cotX | ND | SigK | Positive | 1250557..1250577 | -70:-50 | TAAAAAATAGGGTTCTTCATC |
FT RO | Zhang J, et al. | 1994 |
| cotX | ND | SigK | Positive | 1250539..1250557 | -32:-50 | GACTGAGTCATATATCCTG |
FT RO | Zhang J, et al. | 1994 |
| cotY | cotYZ | SigK | Positive | 1249889..1249912 | -57:-34 | TGAATATATAGACGTTCACCCACA |
FT RO | Zhang J, et al. | 1994 |
| cotY | cotYZ | SigK | Positive | 1249888..1249904 | -33:-49 | GTGTGGGTGAACGTCTA |
FT RO | Zhang J, et al. | 1994 |
| cwlH | cwlH | SigK | Positive | 2649031..2649051 | -160:-140 | CCCAACTTAGGTGATGTCAGG |
beta-gal, PE, HM | Nugroho, F. A., et al. | 1999 |
| ftsY | ND | SigK | Positive | 1668639..1668670 | -83:-62 | AAGAAGTCAAACTTGGACGAATGGAAGTCGAG |
PE, Northan hybri. | Kakeshita, H., et al. | 2000 |
| ftsY | ND | SigK | Positive | 1668589..1668620 | -143:-111 | GAAAGAAATGAAACGCCTGTATAAACAAAAAA |
PE, Northan hybri. | Kakeshita, H., et al. | 2000 |
| spoIVCB | ND | ND | Negative | 2652171..2652201 | -12:+19 | ATACATTTACATATAGGCTTTTGCCTACATA |
FT FT |
Ichikawa H et al. Coppee, J. Y., et al. |
1999 2001 |
| spoIVCB | ND | ND | Negative | 2652179..2652210 | -4:+28 | ACATATAGGCTTTTGCCTACATACTTTTGTGG |
FT | Ichikawa H et al. | 1999 |
| sspG | sspG-yurS | ND | ND | 3352971..3353002 | -99:-68 | TTACCAAATCAAATGCTTTCCTTCGACCTTTT |
ND | Bagyan I et al. | 1998 |
| sspG | sspG-yurS | ND | ND | 3353007..3353039 | -63:-31 | TAATGTGGAAAAACCGCGAAGTTCGTCCAATCT |
ND | Bagyan I et al. | 1998 |
| yoaN | yoaN | SigK | Negative | ND | ND | ND |
Nothern blot, SDS-PAGE,beta-gal, GFP localization | Costa T, et al. | 2004 |