RocR alignment

Link to : Weight matrix

rocR--ACGGAGAGGATAT-----GCAAAAGAATTTTGC-----ACTTGCTGAAATT------
rocD_1--ACGGAGAGGATAT-----GCAAAAGAATTTTGC-----ACTTGCTGAAATT------
rocA_3--TTGAGAAGCCTCC-----GCAAAATAATTTTGC-----ATTTGTTTTTTGC------
rocA_1ATTTGAGAAGCCTCC-----GCAAAATAATTTTGC-----ATTTGTTTTTTGCG-----
rocA_4--AAGAGCAAAAAAC-----GCAAAATAAATTTGC-----GTTCAAGATCGGA------
rocA_2TAAAGAGCAAAAAAC-----GCAAAATAAATTTGC-----GTTCAAGATCGGAAAAAGA
rocD_2_compl--TCGAGGACAAGGT-----GCAAAAACATTCTGA-----TATTTCGAGCGAA------