| abrB_1 | -GAAGGTAAGGATTT---TGTCGAA---TAATGACGAAGAAAAATAT |
| abrB_2 | GATTTTGTCGAATAA---TGACGAA---GAAAAATATAATTTAAA-- |
| dltA | ----AATCATGTGAT---TGTCGAA---AAAACGGGAAGGGAATTTT |
| kinC_1 | TTTTACTCAATTATT---TGTCGAA---GAATGGTACAATAAG---- |
| kinC_2 | ---TCGAAGAATGGT---ACAATAA---GTAGAGAAACACA------ |
| sinI | -----------ACCA---TTCGACA---TCATTCTCGTTTTTTTT-- |
| spo0A_1 | ---ATATAGCGGTTT---TGTCGAA---TGTAAACATGTAGCA---- |
| spo0A_2 | TCAAATTTCATTTTT---AGTCGAA---AAACAGAGAAAAACATAGA |
| spo0A_3 | ----AAAAGAAGATT---TTTCGAC---AAATTCACGTTTCCTTG-- |
| spo0F_1 | CAACAAAAGAGAAAA---TGCTCAG---AAAATGTCGTAAAGTAGAC |
| spo0F_2 | ---ACTGCTTACTTT---TGACGAA---AATCATAATATTGGGGTGT |
| spoIIAA_1 | TAATTACTTAAATTT---TGTCCAG---TCTCCCATCG--------- |
| spoIIAA_2 | TGAAGGAATTCATTC---CGTCGAA---ATCGAAACACTCA------ |
| spoIIAA_3 | AAATTTAAGTAATTA---TGCCGAA---TGACCACTAGTTTTGTC-- |
| spoIIAA_4 | AATGACCACTAGTTT---TGTCACG---GTGAAGGAATTCATTC--- |
| spoIIE_1 | -----TGGAGTTGCT---TAGACAA---CCAGGATGTT--------- |
| spoIIE_1 | -----TTGCTTCGGA---TAGACAA---ATTGTACACG--------- |
| spoIIE_2 | GGAAATTCTTTTCAT---AAACGAA---TATCAAGGCAGAA------ |
| spoIIE_3 | TATCAAGGCAGAAAC---CGTCGAA---GATTTCTTTGGT------- |
| spoIIE_4 | ATTGTTACCTTCTTT---TGACAAA---ATCCTATCTGTGCTTT--- |
| spoIIGA_1 | ----TCTGCTTAATT---TGTCGAG---GAAGTATAATGAGAGGA-- |
| spoIIGA_2 | TTTTTCAGGGAAATC---TGCTTAA---TTTGTCGAGGA-------- |
| spoIIGA_3 | CTCTGTGGGAAAGTC---TGTCAAT---TAATGTTGAGA-------- |
| spoIIGA_4 | ---AACGAATTAGAA---TGTTGAG---AGGTTTGATACGA------ |
| spoIIGA_4 | ---TCTGTCAATTAA---TGTTGAG---AGGAAAATACAAT------ |
Link to : Weight matrix