| spoVD_1 | ---ATTTTATGCCTGAATT-----TGGACAGGT-----AGAACGATGCTCCT------ |
| cotC | TCTGTCTTTTTCTATCATT-----TGGACAGCC-----CTTTTTTCCTTCTATGATTT |
| spoIVCA_2 | --GTAAGGGTATCGACCGA-----GGAACAAGC-----GATCAAGGGATC-------- |
| bofA_1 | CTTCTCATAAGCTTGTACT-----AGAACAAGC-----GAAGGAGATGA--------- |
| spoIVCB_2 | -------TAAGATACTAAA-----AAGACAAGC-----TCTTTAACAACAAAGC---- |
| spoIVCB_1 | -AATTTCCCGGTACAGACA-----CAGACAGCC-----TCCCGGTCACATAC------ |
| spoVD_2 | ----ATTCAGGCATAAAAT-----GAAACAAGC-----CTAAATAAGGAGT------- |
| spoIVCB_3_compl | ------TTGAGAGCGGTTG-----TGGAAAGGC-----ATTGTTTTTCACGTAAGAT- |
| spoIVCA_1 | --TTTAAAATCTCCTCATT-----TGGACAAAC-----AGCTGTTACATAGCATTAC- |
| cotD_1 | --------TTCAAACTTTA-----AAGACAGCT-----TAATTGCACACTTTTAAAA- |
| bofA_2 | --ATTATTGGGATTATTTT-----AGGACTGGT-----TATTCTTCTTTTTT------ |
| cotD_3 | --------AATGAGTAGGA-----TGGACAATT-----GGCGCCATCATATGCGGTCT |
| cotD_2 | --------GTCTTTGCATC-----AGAACATGT-----ACCCCTTATTTTTCA----- |
| cotX | --TATATGACTCAGTCAAA-----ATAAGAGGC-----TCGCTCATTTAATAACAGTA |
Link to : Weight matrix