Regulated Operon: amhX

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
amhX
- 323571..324740 amidohydrolase COG1473 amhX-BAC  

Operon evidence: Northern blotting (1.2 kb transcript); upstream and downstream genes are on the opposite strand
Reference: Kempf B & Bremer E (1996), BSORF
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -42:+17 324801..324859 TTAATTATTCTGAATAGTAGCAATATGTGCTATATTATATACAGCCTATCTTCCTGTTT Kempf B, et al. (1996): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCAGCCTGACACAGGCTGCTTTTTTGATTACTTC
     >>>>>>>>   <<<<<<<<
323561..323579
-8..10
-15.4
amhX

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai