Transcription factor: SigA

Factor type	ND
SWISS-PROT	P06224
SubtiList	BG10314
Consensus seq.	TTGACA(-35)-N14-tgnTATAAT(-10)
Comment	RNA polymerase major Sigma-43 factor (Sigma A). Essential gene.
Link to	Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs

Operon	Regulated Gene	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
abnA	abnA	`2949207..2949261`	`-48:+7`	CTATTTTTTTGTCTGTACAAATTACAGCATAGTGACTACAATAAAGGGGATACCG	Raposo MP, et al. (2004): RG PE
abrB	abrB	`45212..45267`	`-48:+8`	TCTTACAATCAATAGTAAACAAAATGATTGACGATTATTGGAAACCTTGTTATGCT	Perego M, et al. (1988): PE NB RG
abrB	abrB	`45198..45255`	`-50:+8`	TAGTAAACAAAATGATTGACGATTATTGGAAACCTTGTTATGCTATGAAGGTAAGGAT	Perego M, et al. (1988): PE NB RG, binding site mutation
ackA	ackA	`3015424..3015473`	`-44:+6`	CAAGTTGACTTGAAAAGCCGACATGACAATGTTTAAATGGAAAAGTCAGA	Grundy FJ, et al. (1993): PE
acsA	acsA	`3038986..3039055`	`-52:+18`	GGTTTATATTTTAAAAATTGAGAAGAATATGAATATATACTATAATAATTGTGACAACTTCAGCAAAGGG	Grundy FJ, et al. (1994): PE
acuABC	acuA	`3039044..3039110`	`-49:+18`	AAAATATAAACCATGTTGAAAACGCTTTATAATTTGGTATTCTTAAAGAAGGCATGTATTTTTGATA	Grundy FJ, et al. (1994): PE
adaAB	adaA	`203545..203611`	`-49:+18`	ACATTCTAACCACCTTATTTTTTTCTATTTATGAGGTTATAGTGTAGTTATCAAGAATGCTAAACGG	Morohoshi F, et al. (1993): PE
addBA	addB	`1135549..1135616`	`-48:+20`	ACCAATAGATCAGATTGGTCATTTTCGTCAACATTCGATAAAATATAGAGAGATAAAAAGAGAGGGGT	Haijema BJ, et al. (1995): PE
ahpCF	ahpC	`4117869..4117915`	`-41:+6`	TATGGCTTGACAAAAAATATATATTAATTAATAATTCATATATAATT	Antelmann H, et al. (1996): PE HM
ald	ald	`3277273..3277340`	`-50:+18`	TTTCTTAATCAAACAAAGAATTTTCCAAAATATCAAGCTACACTAAAAATATCACATATACAGGAGGA	Siranosian KJ, et al. (1993): PE
alkA	alkA	`203476..203540`	`-47:+18`	GCAAGATAACAAAATGAGTAAAGATGATTATGTGATAAACTAATTTCAACCAGCGTGAGTTTTCT	Morohoshi F, et al. (1993): PE, dinucleotide primer experiment
alsSD	alsS	`3710405..3710467`	`-46:+17`	GAATCGATATTGGAGGTCAATTTCCAAAGAGTGTATAGTGAAACTTATCACAAGATATTTAAA	Renna MC, et al. (1993): PE
amhX	amhX	`324801..324859`	`-42:+17`	TTAATTATTCTGAATAGTAGCAATATGTGCTATATTATATACAGCCTATCTTCCTGTTT	Kempf B, et al. (1996): PE
amyE	amyE	`326998..327064`	`-50:+17`	TTCACTCTGCCAAGTTGTTTTGATAGAGTGATTGTGATAATTTTAAATGTAAGCGTTAACAAAATTC	Nicholson WL, et al. (1987): S1 Chambliss GH, et al. (1988): Genetics and biotechnology of Bacilli, vol.2 p.85-89: S1
ansAB	ansA	`2456045..2456108`	`-45:+19`	ATAATAATGTCTTGCGTATTTTATTTTCCGTGTCTATAATTGCATTAAAAGTATGCGAAAAGCG	Sun DX, et al. (1991): PE
antE	antE	`2602164..2602206`	`-38:+5`	CTTTTGTATTTATTAACAAATGATGGTAAAATTTCTTCAGGAG	Wang LF, et al. (1999): S1
aprE	aprE	`1104913..1104981`	`-51:+18`	CTCAAAAAAATGGGTCTACTAAAATATTATTCCATCTATTACAATAAATTCACAGAATAGTCTTTTAAG	Henner DJ, et al. (1988): PE NB DP Ferrari E, et al. (1988): RG PE DP NB Park SS, et al. (1989): DP S1, in-vitro transcription assay
aprX	aprX	`1861923..1861971`	`-36:+12`	ACTTACCAAACCTATCATCTGTTCATAGAGTATACAGAGAACCTTATAA	Valbuzzi A, et al. (1999): PE DP RG
araABDLMNPQ-abfA	araA	`2948043..2948088`	`-40:+6`	AAAGATTGACAGTATAATAGTCAATTACTATAATAAAATTGTTCGT	Sa Nogueira I & Ramos SS (1997): PE HM
araE	araE	`3484596..3484639`	`-39:+5`	AACATTGACAGAAAATGCAAACAAGATTATTCTATATTTGTACG	Sa Nogueira I & Ramos SS (1997): PE
araR	araR	`3484634..3484679`	`-40:+6`	AATGTTTTCTTACAAAGAACGCTGTGATATACTGAAATTTGTCCGT	Sa Nogueira I & Ramos SS (1997): PE
arfM	arfM	`3829659..3829717`	`-52:+7`	AGGCTGTGAAATACATCACTGCTGTACAGGCTCAGTCGAGCTACACTAAAGCTATCCTT	Cruz Ramos H, et al. (1995): PE Marino M, et al. (2001): PE
argCJBD-carAB-argF	argC	`1194262..1194322`	`-44:+17`	AATATACGATTGAATTAATTTTTATTCATGTTATAATGTTAAATAATTTCACAAAGACCAA	O'Reilly M, et al. (1994): PE Smith MC, et al. (1986): S1, mung-bean nuclease mapping
arsR-yqcK-arsBC	arsR	`2656889..2656932`	`-39:+5`	TGCTTGCATTATTTTAAAAATCATGAGTATAATAAATACATCAA	Sato T & Kobayashi Y (1998): PE HM
spoVFAB-asd-dapG-dapA	asd	`1745187..1745245`	`-41:+18`	AATTCGGTCATCACCCGCATATTCTATGGTAAAATAAAACGTAAAATCATAGTCAAATC	Chen NY, et al. (1993): PE
bglC	bglC	`1939732..1939798`	`-49:+18`	AGAAATTAGGTTGATAGACAATCATGAGAAAGATTTTTACAATGAGTTCGTGCTCATAAGAAGTGTA	Robson LM, et al. (1987): S1
bglPH-yxiE	bglP	`4034832..4034881`	`-47:+3`	AAAATGAAAGCGTTGACATCTCACGAATCTAGTGCTAAAGTATACCTACA	Le Coq D, et al. (1995): PE
licT-bglS	bglS	`4012748..4012800`	`-48:+5`	TTTCCCTGATGATATTGACCTAGTACAAAAAGAATGTACAATCAAGATATAGT	Schnetz K, et al. (1996): PE
blt-bltD	blt	`2716089..2716133`	`-41:+4`	CTCCTTGACTATACGGTAACCATATACCTTATGATTTGATTGTAC	Baranova NN, et al. (1999): RO
bmrU-bmr-bmrR	bmr	`2493778..2493822`	`-41:+4`	TCCGTTGACTCTCCCCTAGGAGGAGGTCTTACAGTATAAGGGATA	Baranova NN, et al. (1999): RO
bsrB	bsrB	`2095317..2095365`	`-43:+6`	CTGACCTCTTGATTAAAAGCGCCTGATGGTGTACTATATTAAAGAAGCT	Ando Y, et al. (2002): NB PE
ccdA-yneIJ	ccdA	`1922295..1922343`	`-44:+5`	TCAAATGAGAAGGAGTATAATGTCTCAATGTCAAATTAAATTATATAAG	Schiott T & Hederstedt L (2000): PE NB
ykuJK-ykzF-ykuL-ccpC	ccpC	`1485275..1485328`	`-44:+10`	GGGCTTGAATAAGAAACTAAGATTTTATTAGAATGGGAGATAAGAAAAACTTAT	Kim HJ, et al. (2002): PE
cdd-era	cdd	`2610606..2610659`	`-48:+6`	TTTTTAGAAATGGGCGTGAAAAAAAGCGCGCGATTATGTAAAATATAAAGTGAT	Wang PZ & Doi RH (1984): S1 RO Song BH & Neuhard J (1989): HM
cggR-gapA-pgk-tpiA-pgm-eno	cggR	`3482888..3482943`	`-42:+14`	CTTAACAGTTGAATAAACAATTCCACCCTGTTAAAATAATTAAAGAAAGCAGAAAT	Ludwig H, et al. (2001): PE
citA	citA	`1020293..1020357`	`-47:+18`	CCCTTTAAAATATTGATTATTTTTTAAATATTATATTTACTATAATAACAGAAAAGGATAGGGGG	Jin S, et al. (1994): PE
citB	citB	`1925773..1925838`	`-48:+18`	AAAAACATTGATATTTACTTATGTATGATTTTGTTTTAATATGAAATTGTGAGAAAATTGTGATGG	Whipple FW, et al. (1992): RO
citG	citG	`3389733..3389789`	`-50:+7`	AAACCTTAGTAGAGGTTATCTTTTCCTGTTAAAAAAATGATATACTGTGTTAGAGTA	Feavers IM, et al. (1988): S1 Tatti KM, et al. (1990): PE Price VA, et al. (1990): DB
citG	citG	`3389719..3389769`	`-44:+7`	TTTTCCTGTTAAAAAAATGATATACTGTGTTAGAGTATTTCATGGAGTAAG	Feavers IM, et al. (1988): S1 Tatti KM, et al. (1990): PE Price VA, et al. (1990): DB
citM-yflN	citM	`833601..833660`	`-48:+12`	ACAAAAAAACCAAATTATTTACTTGCGGTTGGTTTTCCCATACGATGGCAAAAAGGCAAG	Yamamoto H, et al. (2000): PE
citR	citR	`1020291..1020355`	`-46:+19`	CCCTATCCTTTTCTGTTATTATAGTAAATATAATATTTAAAAAATAATCAATATTTTAAAGGGAA	Jin S, et al. (1994): PE
citZ-icd-mdh	citZ	`2981485..2981550`	`-48:+18`	TATAGGTAAACATTTAACAAATGTCTGATTATTGTTTATAATGAGAATAGGCTTAAACTTAAATAA	Jin S, et al. (1994): PE
clpE	clpE	`1437231..1437274`	`-39:+5`	AGACTTGAAAGTCAAAGATAGTCAGAGTATACTATTAATCAAAG	Derre I, et al. (1999): PE
clpE	clpE	`1437112..1437154`	`-38:+5`	TGGTTTGAATGCCGTTAAGTTTGCCGTATACTAATAGTCAAAG	Derre I, et al. (1999): PE
clpP	clpP	`3545181..3545250`	`-50:+20`	AGGCCAGCTTTTTGTTTGACCTTTATTGACCAAAAATGTATCATGTAACTACATACTTACCTAAAAGGTG	Gerth U, et al. (1998): PE HM
clpX	clpX	`2885184..2885233`	`-46:+4`	AACACATTGTTACCGTCTTTTTGGAAAGTATGGTAAAATGCAATACATAC	Gerth U, et al. (1998): PE
codV-clpQY-codY	codV	`1686420..1686468`	`-43:+6`	GTATTGATTGCAACCTGAGCGCGATTTGTGATACCATTTAAAAGCCCTT	Slack FJ, et al. (1995): PE
comA-yuxO	comA	`3252500..3252561`	`-43:+19`	CGGAAACGACTTGGCACAGGCCAAGTCTTTTTTATAAAATGGAAAAGAGTGAGTAAAAGGGA	Weinrauch Y, et al. (1989): S1
comC	comC	`2864411..2864479`	`-53:+16`	TTGAATATTCCCAATTGGAGCTCAGGATGTCCATTTTGCTACAATCCATACCAGAACTCAATGAGTAAA	Mohan S, et al. (1990): PE
comEABC	comEA	`2641238..2641306`	`-50:+19`	ATGCTTTTTTATGCTTTTGCAGTACAGACGAACGTATGACATACTCGTCTACACATGAAACTGCTTTTT	Hahn J, et al. (1993): PE S1
comFABC-yvyF-flgM-yvyG-flgKL	comFA	`3642587..3642651`	`-46:+19`	TATTTTAATAGTTGGACAGAAAATATTCATTCAGGCATACTGTTTCGAAAGGAGGCGTGCTATGT	Londono-Vallejo JA, et al. (1993): PE S1
comGABCDEFG-yqzE	comGA	`2559313..2559378`	`-49:+17`	ACGTTTTCCCTGTTTGATTACCTTTTCTTCTTTTTCTACAATATGCGTTGAAAGGAGAGGGAATCA	Albano M, et al. (1989): PE
comK	comK	`1116328..1116396`	`-49:+20`	AAATGTTAAAAAAACCTGTCGTTTTACAAAAACAGATGATAGATTATTAGTATAAATTTTGCAGAAAAA	Van Sinderen D, et al. (1994): PE
comQX	comQ	`3255994..3256062`	`-51:+18`	AAAAACGAAAAACCTGCTGTCCTTTAAATGTCCCATTTAGTAAAATGGAATGGGAGGGGGGAAGTCGTT	Weinrauch Y, et al. (1991): PE
csbA	csbA	`3614401..3614444`	`-40:+4`	ACGATTGTCCGATTCTTCATTTTTTACTATAATCAGATCAGATG	Boylan SA, et al. (1991): PE DB RG
cspB	cspB	`983904..983971`	`-50:+18`	AATTTCAATAAGCAGTTGTTTTTTCTGAAGATTACTGGTAGAGTAAAGGTAATTATTTTTGTTCGAAC	Willimsky G, et al. (1992): PE
cssRS	cssR	`3384589..3384660`	`-63:+9`	TCATCCTACATCTTCCTCGCTCTTTTTCTCTTCCTTTCTTCCCTTAACCATATCATAAACAAACATTGTGGG	Darmon E, et al. (2002): PE
cssRS	cssR	`3384687..3384743`	`-46:+11`	TATGAAAATTGCCTGCCGTATGTTAAAACTAGTTTATAATGACGTTGAAAGGATGTG	Darmon E, et al. (2002): PE
ctaA	ctaA	`1558295..1558342`	`-39:+9`	GGAATTGCCACAAAACACATATTCGCTTACACTTGGAACGTATATAAA	Paul S, et al. (2001): PE, in-vitro transcription assay
ctsR-mcsAB-clpC-radA-yacK	ctsR	`101363..101414`	`-43:+9`	CGAGAAAGTTGAAAATTCTCGAGAAACGGCTTATAGTAAGATTAAAGTCAAA	Kruger E, et al. (1996): NB PE
cydABCD	cydA	`3978401..3978448`	`-39:+9`	GGCTTTATTTTTGAAATGAATCGTTGTAAAGTACTTAATATGAACCAG	Winstedt L, et al. (1998): PE RG NB
cysHP-sat-cysC-ylnDEF	cysH	`1629364..1629418`	`-39:+16`	AGTCGGGTTGACTTATGTTAGAATTGTGCTAAAATTTACTACAAATCTAAAAACT	Mansilla MC, et al. (2000): NB DP
cysK	cysK	`81687..81735`	`-41:+8`	AAGTGATTGACAAAAAATTTTGAAATTGATAGATTATATACATAATACC	Van der Ploeg JR, et al. (2001): PE
dctSRP	dctP	`499642..499691`	`-43:+7`	TCATAAACTTCCCCAGACTGTATGAAAACGCTATCATTCTAGTAAGAAAG	Asai K, et al. (2000): PE
degQ	degQ	`3256332..3256399`	`-48:+20`	TTTGCATACTTTTCGGTGAAAAATGAGCCGAAAGCAGACACACTATTAGTAACAGATCAAATACCTAG	Yang M, et al. (1986): S1
degSU	degS	`3645673..3645739`	`-52:+15`	ATTCGTACAGTCTTTAGAATTTTTGTGCGTATTTTGGTATCATAAAGAGTAGATAGTATATAAAAAT	Msadek T, et al. (1990): PE
des	des	`2088536..2088583`	`-43:+5`	GTGTGCTACTACAAAAGACTTCTCTCATTAGCGTATACTGAACCGAGA	Aguilar PS, et al. (1999): PE HM
dhbACEBF	dhbA	`3291430..3291469`	`-39:+1`	ATATTTGACTGTCACATGACATTTGGATATGATTATTTTT	Rowland BM & Taber HW (1996): PE
murE-mraY-murD-spoVE-murG-murB-divIB-ylxWX-sbp	divIB	`1592869..1592932`	`-45:+19`	TGATTCAAGTTCTGACTGAAGCTGTTCATATGACATACTGTAAGCAAACGAACAAACGGCATCA	Harry EJ, et al. (1994): PE DB SDM RG DP NB
dnaAN	dnaA	`110..174`	`-47:+18`	TTGTGACAACCATTGCAAGCTCTCGTTTATTTTGGTATTATATTTGTGTTTTAACTCTTGATTAC	Moriya S, et al. (1988): S1 Ogasawara N, et al. (1985): S1
lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV	dnaJ	`2625156..2625208`	None	AAAGGAATTGAAAAATCATAATTCAAAATGATACAATCTAATTTATGTGAGAA	Homuth G, et al. (1997): NB
dppABCDE	dppA	`1359626..1359690`	`-46:+19`	TTCCCAGTTATATTGCATTTTTCCTCTTTTTTTAATATAATTTGTTAGAATATTCATAATTTAGT	Slack FJ, et al. (1991): PE
deoR-dra-nupC-pdp	dra	`4051310..4051379`	`-60:+12`	ATTGAACAAAATTTCAATTACCAATTTACATATGTTCAAAAGTCGGTTATGCTAAAAAATATCTTAACAA	Saxild HH, et al. (1996): PE
drm-punA	drm	`2447656..2447714`	`-42:+17`	AATACATTGTCAACGGGAATGAAAACGGTTTATACTTGAGTTGTCAGACCTCTTAGCGA	Schuch R, et al. (1999): PE
drm-punA	drm	`2447638..2447684`	`-41:+6`	TATACTTGAGTTGTCAGACCTCTTAGCGATACAATAGACGTATAGAA	Schuch R, et al. (1999): PE
fabHAF	fabHA	`1207422..1207475`	`-40:+14`	AATATATTGCCATGTGAAAAAAAATAGGATAGAATTAGTACCTGATACTAATAA	Schujman GE, et al. (2003): PE
yfhQ-fabL-sspE	fabL	`935931..935978`	`-43:+5`	ACCTGGTATGGAATATTTCAGTGTTTTTCGGTAAAGTAAAACAAGTGT	Yamamoto H, et al. (1999): NB PE
yfhQ-fabL-sspE	fabL	`936203..936247`	`-39:+6`	TTGATTGGCCTTCTTCGTTCAAATAAGGCATAATTTGCTGAAAGG	Yamamoto H, et al. (1999): NB PE
fapR-plsX-fabDG	ylpC	`1661192..1661254`	`-45:+18`	ATCGTTGCATTCCAATCTATGAAATTATATACTACTATTAGTACCTAGTCTTAATTGTCCGGA	Schujman GE, et al. (2006): PE
fbp	fbp	`4127002..4127052`	`-46:+5`	GTTTTAATTGTCTCTAAAAGCAGTTATGCGGTACTATCATATAAAGGTCCA	Fujita Y, et al. (1998): PE
feuABC-ybbA	feuA	`183352..183404`	`-42:+11`	GGAATTTGTCCATGGTGTTATATCTGTTCATTCTCTATAATTCCAATTGATAA	Fuangthong M & Helmann JD (2003): PE
fla-che	flgB	`1690470..1690516`	`-44:+3`	CGAACTTCATAGACTTTATGCCTGTTATTTCTTACAATAAGCATATA	West JT, et al. (2000): PE DP, Western blot Estacio W, et al. (1998): PE
ftsAZ	ftsA	`1595698..1595762`	`-47:+18`	AAGCCACATTCATTGTATTGTTGTTCCGCAAATAATAGAATAGAAATGATCGAAATGTGAGGAGG	Gonzy-Treboul G, et al. (1992): PE RG Fukuchi K, et al. (2000): DP RG
ftsAZ	ftsA	`1595438..1595503`	`-48:+18`	CAATAAGTTTAGCTTTTCTGGGAGTCCATCTTGGTGTAGACTTGTATTTAGCAGGTATATTCGCAT	Gonzy-Treboul G, et al. (1992): PE RG Fukuchi K, et al. (2000): DP RG
ftsH	ftsH	`76910..76958`	`-42:+7`	ATTGTTTGTATTGGAATGATTTTCTATGGTACTATTGAACATAGTTGTG	Deuerling E, et al. (1995): PE
fur	fur	`2449497..2449544`	`-39:+9`	TATAGTTGGAACTCTGCGCGTATTTTGTTATAATGAGTCATGGAATGC	Fuangthong M, et al. (2002): PE HM
gapB-speD	gapB	`2967131..2967188`	`-48:+10`	TTATCAATATGTACTGGCGAATTTGTTTTAATGTGTTATACTAATTTTAGATAGTAAC	Servant P, et al. (2005): PE
gabP	gabP	`686148..686196`	`-40:+9`	AATTTTCGACAAACTGTATATTTATGATAGAGTTTCAATTATCATAATA	Ferson AE, et al. (1996): PE HM
gabP	gabP	`686137..686186`	`-42:+8`	AAACTGTATATTTATGATAGAGTTTCAATTATCATAATATTCAGTAATGA	Ferson AE, et al. (1996): PE HM
gabR	gabR	`441073..441123`	`-45:+6`	TCGGTATTTTCTTATCATTCTGACTTCTCTTTGGTATGATGAAAAGTACCA	Belitsky BR & Sonenshein AL (2002): PE
gabTD	gabT	`441072..441128`	`-39:+18`	TTGGTACTTTTCATCATACCAAAGAGAAGTCAGAATGATAAGAAAATACCGACAGGG	Belitsky BR & Sonenshein AL (2002): PE
galE	galE	`3990006..3990054`	`-41:+8`	AAATGGATGTGGACCGGTTCTAAACACTATATAATGAAAACAGGTCATT	Krispin O, et al. (1998): PE
gcaD-prs-ctc	gcaD	`56274..56338`	`-48:+17`	CATGAAGTCTCCTTGAAATCAGAAGATATTTAGGATATATTTTTCTATGGATAAAAGGGATATTG	Moran CP Jr, et al. (1982): RO, dinucleotide priming Henkin TM, et al. (1988): Genetics and biotechnology of Bacilli, vol.2 p.63-67: SDM RG RO Whipple FW, et al. (1992): RO
ggaAB	ggaA	`3671498..3671582`	`-59:+26`	TGATGATTTACATTTTTAAAGAGCCTTAACTTTTATAGGAACATATGCTATTATTGTTTATTATTAATGGAACGTAAAAAATATG	Freymond P-Ph, et al. (2006): PE
glnRA	glnR	`1877082..1877147`	`-49:+17`	TCCTTACATCGTATTGACACATAATATAACATCACCTATAATGAAACTAAGTTAAGAAAAGGAGGA	Strauch MA, et al. (1988): RO
glpD	glpD	`1004147..1004210`	`-46:+18`	GCAGCTATGGCTTTTAAATAAAGTAATACTATGGTATAATGGTTACAAGTTAATAAGAACGGTC	Holmberg C & Rutberg B (1991): PE
glpFK	glpF	`1001640..1001704`	`-47:+18`	GACGGAAAGTGATTGACACCGCTTTCATGCACTGATACAATTGCACTAGGTTAATACATTGTGAT	Holmberg C, et al. (1990): PE
glpTQ	glpQ	`233907..233962`	`-46:+10`	AATAGTTTTCCAACACGCCGTTTACATCCGTTTTTTATTATGAAAGACAGGTAGTG	Antelmann H, et al. (2000): NB PE
glpTQ	glpT	`235454..235516`	`-45:+18`	GAAAATTACCCGTTTACATTCGCTCCGGACTATGATAATTTAAGAAAGCGCTATCATGATAAG	Nilsson RP, et al. (1994): S1
ybgJ-ybgH	ybgJ	`265240..265314`	`-55:+20`	AAAATGTTTTTGTCGTATTTTGTATGATTCTGTAGTCTCCATTATACAGTAATTATACCTTCCGCTATTATGAAA	Satomura T, et al. (2005): PE
gltAB	gltA	`2013881..2013945`	`-47:+18`	CTAAATTATATATTGTTTATATCGTTTTGAAAACCTACAATGATTATAGAGTTGTTAGATTTTAT	Bohannon DE, et al. (1989): S1 Belitsky BR & Sonenshein AL (1997): PE
gltR	gltR	`2724967..2725025`	`-50:+9`	TCTAAGCTTTAGTTTACATGAAGCTCTGCTATCATATATAATTCAAAATTAAGATGGAA	Belitsky BR & Sonenshein AL (1997): PE
gltC	gltC	`2013903..2013965`	`-46:+17`	TCATTGTAGGTTTTCAAAACGATATAAACAATATATAATTTAGATCAAAAGAATCTCAAAATG	Bohannon DE, et al. (1989): S1
gltX-cysES-yazC-yacOP	gltX	`110948..111010`	`-52:+11`	GGCTAACTTGTTTTGATGCCGGGTCTATTTGGTGGTAGAATAGATTCATACATTTTTGCCTGA	Gagnon Y, et al. (1994): S1
glyA	glyA	`3789499..3789544`	`-41:+5`	ATCTTTTACATCGGCCTTAAAAACCATGTACAATAGTGATGGTAAA	Saxild HH, et al. (2001): PE RG
gntRKPZ	gntR	`4112360..4112422`	`-47:+16`	ATGAAAGTGTTTGCATAAAAGAAATATTCACGTTATCATACTTGTATACAAGTATACTCCTTG	Fujita Y, et al. (1986): S1
gntRKPZ	gntZ	`4116036..4116103`	`-42:+26`	CGTTGCTGGACTGGGATTCATTTTATTGTTAAGTTTAGTTGTATGAAATTAAGAAGGAGCTGTAACAC	Fujita Y, et al. (1986): S1
groESL	groES	`649341..649401`	`-43:+18`	CTTATCACTTGAAATTGGAAGGGAGATTCTTTATTATAAGAATTGTGTTAGCACTCTTTAG	Li M, et al. (1992): PE
gtaB	gtaB	`3664539..3664585`	`-40:+7`	AAAGCTTGTTTAAAAATGGTTTATCCGATATCATAAAAATGTGTAAA	Varon D, et al. (1993): PE
guaA	guaA	`691913..691976`	`-46:+18`	AGAAGATGGTCTTGACCGCTTATCGACGTGTTGTTAGAATTAGTGAATATTATCGGAGTCTGGG	Mantsala P, et al. (1992): PE
guaD	guaD	`1382470..1382518`	`-41:+8`	TTAAGAATGTTCTTTGCATTCTTTTCGGCTATACTAATAACACTCTATT	Nygaaard P, et al. (2000): PE HM
gudB	gudB	`2402584..2402633`	`-43:+7`	TTTATTCTATGCACAGATCATATGAAGGTGTATACTATTCTCTGAAAGGG	Belitsky BR & Sonenshein AL (1998): PE
gutBP	gutB	`666904..666967`	`-46:+18`	GCAGGAAAGGCTGTTGAACGTGTTAAAAAGCAGATAAAATGGGGGCAGTAACAGAGAAAACAAA	Ye R, et al. (1994): PE SDM
gyrA	gyrA	`6870..6933`	`-45:+19`	AGCAATTTAATGTGTATAATCATAAGTTTATTGATATAATGGAGAATAGTGAAATCGTATTGAA	Ogasawara N, et al. (1985): S1
hbs	hbs	`2385182..2385239`	`-40:+18`	AATGCTTGATATGGCTTTTTATATGTGTTACTCTACATACAGAAATTCTTCACTTTGT	Micka B, et al. (1991): PE NB Micka B & Marahiel MA (1992): PE NB Fernandez S & Alonso JC (1999): RG PE
hbs	hbs	`2385221..2385273`	`-43:+11`	TAAATCCTTGACGAGCAAGGGATTGACGCTTTAAAATGCTTGATATGGCTTTT	Fernandez S & Alonso JC (1999): RG PE
hemAXCDBL	hemA	`2878247..2878314`	None	TTTTAAAATCTGTTCACATTTTGTGAAAGAAACTATGTTATAATTATTATAAATAATGAGTTCTATGT	Hansson M, et al. (1991): S1
hemZ	hemZ	`1056918..1056963`	`-40:+6`	CCGGATTGATTTTAGCAGTTTATTTCTGTACACTAAAGAAAGTTTT	Homuth G, et al. (1999): PE NB
lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV	hrcA	`2628888..2628954`	`-49:+18`	TGGGTGAGTTATAATTGACATTTTTCTTGTGGTTTGATACTTTTGTTATAGAATTAGCACTCGCTTA	Wetzstein M, et al. (1992): PE NB Homuth G, et al. (1997): NB
htpG	htpG	`4090362..4090407`	`-41:+5`	ATCTAATTGACAATTGTCATCTTATGTGATAAATAGATGCTGAAAA	Schulz A, et al. (1997): PE NB
htrA	htrA	`1358646..1358696`	`-44:+7`	TAATCTTTTCATTTTTATCCCACAGTTTTTGTTTATGATAAACTCAAGTCA	Noone D, et al. (2000): PE RG
hut	hutP	`4040423..4040485`	`-46:+17`	AAAAAACCTTTTGACTTCTGCTGCTGAACCAATTAATATAATACTCAGTTAATAGTTATCAGA	Wray LV Jr, et al. (1994): PE
citZ-icd-mdh	icd	`2980091..2980153`	`-45:+18`	GCCTCTTGTTCAGACATCAAAATTGGGTTACACTTTAAATTGAATGTTAGGAAAAATCATTTT	Jin S, et al. (1994): PE
ilvBHC-leuABCD	ilvB	`2896500..2896563`	`-45:+19`	AAAAAATGCTGTTGACACTGCGTCCAAAGCGGCGTAATATGAGTTCAACAAAAGATAAATGCAA	Grandoni JA, et al. (1992): PE SDM RG
infC-rpmI-rplT-ysdA	infC	`2952623..2952661`	`-38:+2`	CTTGACTAAAGATCCGGTATTGTGTAGAATAGTTATTGA	Choonee N, et al. (2007): PE
iolRS	iolR	`4083750..4083793`	`-39:+5`	CTATTGATTAACTTTTGGTTTTTATTATATATTTATGTTACGTA	Yoshida KI, et al. (1997): PE
ispA	ispA	`1386325..1386381`	`-47:+10`	CAAATGGCTCTGTCCGAGCGCTTGCTTTTTTCATATAATATGAGGCAACACCCTTGA	Koide Y, et al. (1986): S1
ydjK	ydjK	`675661..675706`	`-41:+5`	TTTATATTGACTGAAAGCGTTTTTATAATTATGATAATATCAGATA	Yoshida K, et al. (2002): NB PE FT
kdgRKAT	kdgR	`2324875..2324922`	`-43:+5`	AAAAAACTCTTCCCAAATTTTAAAATTATGGTATTCTTTTGTTGTAAC	Pujic P, et al. (1998): PE
kinB-kapB	kinB	`3229043..3229086`	`-37:+7`	ATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTT	Trach KA & Hoch JA (1993): PE
kinC	kinC	`1517569..1517632`	`-46:+18`	TACATATTTTACTCAATTATTTGTCGAAGAATGGTACAATAAGTAGAGAAACACAAGCGGCAGG	LeDeaux JR, et al. (1995): PE Kobayashi K, et al. (1995): PE
ldh-lctP	ldh	`329230..329277`	`-39:+9`	TCTCTTGCAAAAGTTTGTGAAGTGTTGCACAATATAAATGTGAAATAC	Cruz Ramos H, e al. (2000): PE
lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV	lepA	`2631997..2632066`	`-58:+12`	ACTTTTCTCTTTCTTGTTTTACATTGAATCTTTACAATCCTATTGATATAATCTAAGCTAGTGTATTTTG	Hippler B, et al. (1997): PE
licBCAH	licB	`3960937..3960982`	`-40:+6`	CTGAGTGTTTATGAAAGCGATTTCATAATATGATGATAGCAACAGC	Tobisch S, et al. (1997): PE NB
licR	licR	`3963022..3963063`	`-38:+4`	GTTCATTGACTTGCCATTCTCTCCATTATAGAATTTATATAC	Tobisch S, et al. (1997): PE NB
lmrAB	lmrA	`290285..290340`	`-48:+8`	CAATGAATTTTTCTTGACAATTGATGATTGAATCAAGATAATAGACCAGTCACTAT	Kumano M, et al. (2003): PE
lonA-ysxC	lonA	`2881937..2881997`	`-44:+17`	TCTTTTCCTTTTTCATATCAGAAAGAAAGGGTATACTACGAGGAGACTGTTTTATAGAAAA	Riethdorf S, et al. (1994): PE
lonA-ysxC	lonA	`2881865..2881928`	`-47:+17`	TGCCGTTTATTGTACAAGGATGAAAAAGTTGTATTATAATGGTTCATACTAAAGTCACGGAGGT	Riethdorf S, et al. (1994): PE
lrpC	lrpC	`475547..475611`	`-43:+22`	GAACTGTACTTGTCATTTACAAAAATACCCGAGATAATGTGTACAAAATCAAAAAAGAAGGATGT	Beloin C, et al. (2000): PE
lysC	lysC	`2910130..2910194`	`-48:+17`	GCAAAAATAATGTTGTCCTTTTAAATAAGATCTGATAAAATGTGAACTAATTTCATAGTTAGATC	Chen NY, et al. (1987): PE Chen NY, et al. (1988): Genetics and biotechnology of Bacilli, vol.2 p.69-74: PE
lytABC	lytA	`3662154..3662199`	`-39:+7`	AGTTTCATTGTTTCTTAATTTTTCTTTAAAATATAAAATAGGTTGA	Lazarevic V, et al. (1992): PE
lytR	lytR	`3662248..3662291`	`-39:+5`	AGAGTTGTATTTATTGGAAATTTAACTCATAATGAAAGTAATTT	Lazarevic V, et al. (1992): PE Huang X & Helmann JD (1998): RG PE RO
maeN	maeN	`3243747..3243798`	`-40:+12`	TTAAAAAAATATGAAGTGTTAACGCTTTCTTGTAGACTGTAACAAACAATAC	Tanaka K, et al. (2003): PE
malA-yfiA-malP	malA	`889289..889335`	`-42:+5`	AACGTGTTACGGGACGAGCTATCTCATGGTATAAATGGAATTGTAAA	Yamamoto H, et al. (2001): PE NB RG
mecA	mecA	`1228280..1228344`	`-48:+17`	AAGGTTAAGATGTGGACGGAATGGGTAAAGTGTAGTAAAGTACAATTAATCGGGAGCTTAGATGT	Kong L, et al. (1993): PE
med-comZ	med	`1205806..1205856`	`-40:+11`	AGTGGAAAAGACAATTTTCATCAATTTTCGACAAATATTAAGAAAAACCTT	Ogura M, et al. (1997): PE HM
med-comZ	med	`1205806..1205856`	`-46:+5`	AGTGGAAAAGACAATTTTCATCAATTTTCGACAAATATTAAGAAAAACCTT	Ogura M, et al. (1997): PE HM
menBEC	menB	`3148736..3148799`	`-47:+17`	ACTCATTCACATAGAGAATAAAAGGAGGTCATCATATGGCTGAATGGAAAACAAAACGGACATA	Driscoll JR, et al. (1992): PE
menBEC	menE	`3147838..3147903`	`-50:+16`	GCTGTTTTCTTTTCAATACAGACATTTTACCTCGGAGATGATGACATGCTGACAGAACAGCCCAAC	Driscoll JR, et al. (1992): PE
menBEC	menF	`3152843..3152904`	`-44:+18`	GCTTGTTTCTTTTTCATTTCTGAAATTAGGTTTATAATAGGTAAGGCAGGCCATTTGGACTG	Qin X, et al. (1996): PE
mmsA-iolBCDEF-idh-iolHI-fbaB	mmsA	`4083586..4083632`	`-39:+8`	ATGATTGACTTATGGGTATTATGCGATTAGAATATAACCAAGAAATG	Yoshida KI, et al. (1997): PE
mrgA	mrgA	`3382504..3382567`	`-60:+4`	CTAAATTATAATTATTATAATTTAGTATTGATTTTTATTTAGTATATGATATAATTAAGTCAAC	Fuangthong M & Helmann JD (2003): PE
mta	mta	`3763940..3763984`	`-41:+4`	GGGATTGACCCTAACGTTGCGTGATTGTTTACGATAAAAAAGAGG	Baranova NN, et al. (1999): RO
mtrAB	mtrA	`2384573..2384627`	None	CATTCACTTTGCTTTTAGCGGGGCATATGTGCTAGAATCGAAATTAAATGTATTC	Gollnick P, et al. (1990): HM SDS-PAGE RG
nadBCA	nadB	`2848707..2848769`	`-47:+16`	ATAAAAAACTCTTGAGTTTATTTTATCCTTGTGTAAATATAGGTGTCAAGACAGGTGTAAACA	Sun D & Setlow P (1993): PE
nadE	nadE	`337721..337766`	`-43:+3`	TCTCTTGTTCACAGTGAATGAAGACCTGTGCTATATTTAATAGGGA	Antelmann H, et al. (1997): PE
narGHJI	narG	`3828987..3829053`	`-53:+14`	AGTGTGTGACATAGTTCACAAGGAAACACGCTGTCTCTGTTTATAGTGAACTTAGCATCACCTGACT	Cruz Ramos H, et al. (1995): PE Reents H, et al. (2006): PE
nasA	nasA	`362411..362471`	`-43:+18`	CACATGTCTTTTCCAGAAAATAATGGTCCTATATCCTTGATTCAGAAAATGTAAAATAATG	Nakano MM, et al. (1995): PE
nasBCDEF	nasB	`362338..362403`	`-49:+17`	TTGTGACACGTTTAATGCGTTAACAATGCATTGTGACATAATTTTTAATAGGAGAAAACTTACGAG	Nakano MM, et al. (1995): PE
nfrA-ywcH	nfrA	`3911265..3911309`	`-41:+4`	TTTCACTTTTGAGATCACTTTTTTTCGGATATGATAAAAAGTGAT	Moch C, et al. (2000): PE
nifS-yrxA	nifS	`2848710..2848774`	`-47:+18`	TTACACCTGTCTTGACACCTATATTTACACAAGGATAAAATAAACTCAAGAGTTTTTTATGGAGA	Sun D & Setlow P (1993): PE
nrgAB	nrgA	`3755720..3755784`	`-47:+18`	TCTTACATGAAAATGTTTTATCATTCTTTTTTCTCTATAATGAAGAAATATAATAATTGCTTTTT	Wray LV Jr, et al. (1994): PE
ylxS-nusA-ylxRQ-infB-ylxP-rbfA	nusA	`1730845..1730908`	`-46:+18`	GCGTATATCCATTTGCAATAAAAATATGGTTATGGTATAGTTTTATTGGAAATGCTAACGATTA	Shazand K, et al. (1993): PE
odhAB	odhA	`2110909..2110972`	`-48:+16`	TTTTTTACTATTTTGTGAACAATCAAGGTAGAATCAAATTGCAAACAGTGGTAAAATATCGTTG	Resnekov O, et al. (1992): PE
kinE-ogt	ogt	`1420586..1420644`	`-48:+11`	GGGGAACTGGACTTGGGCTTATGGTAAGCTATAAAATTATTGAAGAACATCAAGGCGAG	Morohoshi F, et al. (1989): PE
opuAABC	opuAA	`320461..320508`	`-43:+5`	GATGTTTATAAAGAAATGGTACAGAATAAAAGAGAATATGCTGTTTGT	Kemph B & Bremer E (1995): PE
opuAABC	opuAA	`320495..320546`	`-47:+5`	AATATGCTGTTTGTGTGGGAAGTTACATAAATGTTACGGTAATAAAGATTGC	Kemph B & Bremer E (1995): PE
opuBABCD	opuBA	`3462338..3462392`	`-42:+13`	GTAAACTTTTTATTTTATAAACTTTATTCTATAATGGGAAGCATTCAATTGTCTG	Kappes RM, et al. (1999): PE
opuE	opuE	`727768..727810`	`-40:+3`	CGCTTGAATGGCCGGGAATACTTTGTTAGGTTAAGTTACCAAG	Von Blohn C, et al. (1997): PE Spiegelhalter F & Bremer E (1998): NB RG DP SDM
pabBAC-sul-folBK-yazB-yacF-lysS	pabB	`82785..82834`	`-43:+7`	GAAATTCACTTTTTTCACTAACAACATTGCTTTACAATTAAAAACAAGTA	De Saizieu A, et al. (1997): PE RG NB
pckA	pckA	`3128481..3128554`	`-59:+15`	ACACACAAAAAACAATAAATAGTATAGACTATTTGAAAATATATGTTATACTAATTCACAATTAGCAAAACACA	Servant P, et al. (2005): PE
pbpD-yuxK	pbpD	`3232888..3232952`	`-47:+18`	CTAAATTTAACCTTCTCGTAATCTCAAAAGAATGGTACGATATGGCTAGAATTTAGGAGAAAAGA	Popham DL, et al. (1994): PE
pbpF	pbpF	`1083039..1083103`	`-49:+16`	GCCACCTCCTGCTTGCTAGTATATCAAAACAATGGTATAAGTTTCTATTGGCGAGTGCTTCGAAC	Popham DL, et al. (1993): PE
pdhABCD	pdhA	`1527498..1527573`	`-64:+12`	AAGGTTTTGGCAAACTGGGGATCGGCTAAAATATAATACGACTTACTGCTGATACTTTAGGGTACCCTAAGTTTGT	Gao H, et al. (2002): NB PE Hemila H, et al. (1990): NB
pdhABCD	pdhC	`1529690..1529767`	`-70:+8`	AGACGTTCTTGAAACAGCAAGAAAAGTGCTTGAATTTTAATCAAACTGCATAATCGAGAGGGAAGATGAACGTTTTCC	Gao H, et al. (2002): NB PE Hemila H, et al. (1990): NB
perR	perR	`943734..943779`	`-41:+5`	ATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACA	Fuangthong M, et al. (2002): PE HM
cggR-gapA-pgk-tpiA-pgm-eno	pgk	`3480659..3480716`	`-49:+9`	AAAGGACCTGACTTGGTTCTTTCGAATAGAAGCGCTATAATGAAAGCGGACAAGGGAA	Ludwig H, et al. (2001): PE
pheST	pheS	`2929854..2929896`	`-38:+5`	AGTGTTGCGCCAAGCGTTGGATTTCTCTATAATAGAACATAAT	Brakhage AA, et al. (1990): PE S1
phoA	phoA	`1017751..1017820`	`-53:+17`	TTGTTTACATGATCAACAGCCGCATTTAACAAAGTTTCCCTAACATGATAAACGGAATACATTAAAGGAG	Hulett FM, et al. (1994): PE
phoB-ydhF	phoB	`621065..621113`	`-45:+4`	AAATCGATTAATACTAGCTTAACAGTTTAAAAATATAATTGGGTTGTCA	Chesnut RS, et al. (1991): PE DP Abdel-Fattah WR, et al. (2005): RG Allenby NE, et al. (2005): DB AR
phoPR	phoP	`2977627..2977670`	`-40:+4`	CGAATTGTCGGAATGTCCTGCTTTCGCTAAAATAAAATCATGAA	Pragai Z, et al. (2004): NB PE Paul S, et al. (2004): PE, in-vitro reconstitution
phoPR	phoP	`2977605..2977649`	`-39:+6`	TTTCGCTAAAATAAAATCATGAAACATGTTAAGATGACATAAAAT	Pragai Z, et al. (2004): NB PE Paul S, et al. (2004): PE, in-vitro reconstitution
phoPR	phoP	`2977733..2977782`	`-45:+4`	ATTATCCTAATAAAAAGAGAGAAAGGCTTGCTTAATACAGCCTTTCTCTT	Puri-Taneja A, et al. (2005): PE, in-vitro reconstitution
rapE-phrE	phrE	`2659450..2659490`	`-33:+8`	GTTAGGAGGCAACCTTTTCGATTATAATGGGAAAATAGAGG	McQuade RS, et al. (2001): PE RG
rapI-phrI	phrI	`547830..547899`	`-37:+5`	AAGAATGCATTTTCATATCTGGCTTCGAGAAAAATGTTTGCTGATGTTGAAAATTTTTCGATTGAAGTCG	McQuade RS, et al. (2001): PE RG
pmi	pmi	`3687717..3687765`	`-43:+6`	AAAGGCTGAAACAAAGCTTGAAAAGCTGCACATATAATAGATAGGAAGC	Margot P, et al. (1994): PE SDS-PAGE
ppiB	ppiB	`2434999..2435062`	`-47:+17`	AGCCGCGACAAGGAGAGACAGGCTATAACCTATACATAATCTCCTTTGAAAATTAAAATAAAGA	Herrler M, et al. (1994): PE
pssA-ybfM-psd	pssA	`247502..247547`	None	GCGTCTTGTCCTTTTTATGCGGGGGGATAAAATAGTAAGGAACATG	Cao M & Helmann JD (2004): ROMA RG
pssA-ybfM-psd	pssA	`247562..247606`	None	CATTTTTCAAAAGGTAACAAATGTTGTATAATAATAGAATTTGAA	Cao M & Helmann JD (2004): ROMA RG
pst	pstS	`2580884..2580933`	`-42:+7`	TTCGGTTCAAACCCTTTTTACATAGAACCTTTACTCTATACGTGTAGGAC	Qi Y, at al. (1997): PE RG
pta	pta	`3865381..3865423`	`-38:+5`	CTGTTTGAATTTGATTGGAAGAAGAGTATGCTAGTAAAAGAAA	Shin BS, et al. (1999): PE
ptsGHI	ptsG	`1458612..1458657`	`-37:+9`	TGCTTGTCAGATGACAAGTACGGTTGTATGATATAATATTGTGAAG	Stulke J, et al. (1997): RG NB PE
ptsGHI	ptsH	`1456115..1456166`	`-45:+7`	TGTTGTTATTGAAAAATGAATATCCGCTATGCTACAATACAGCTTGGAAATT	Stulke J, et al. (1997): RG NB PE
pucABCDE	pucA	`3340079..3340125`	`-40:+7`	CTTCGTTTGACTCTTTTTACAAATCCTCTTTCTATGTGTTTCATTTT	Beier L, et al. (2002): PE HM
yurHG	yurH	`3342719..3342765`	`-41:+6`	CTGTCAATGAACTATCATGTTGCTCCTTCTATAATGAAGTCACCATA	Beier L, et al. (2002): PE HM
pucH	pucH	`3327676..3327719`	`-39:+5`	TTGCTGATGTAATACGATCATAGTAGCAGTAAACTGTTGAAAAT	Beier L, et al. (2002): PE HM
ywoE	ywoE	`3752831..3752879`	`-43:+6`	ATAGCCAGTGTTATTGTCTGACTCTTCAGTTATATTAAGTGACATCTAA	Beier L, et al. (2002): PE HM
pucRJKLM	pucJ	`3329461..3329506`	`-40:+6`	ATCCAATGACACCCCTCGACCGGAACGATATTATGTTACTAAAGTT	Beier L, et al. (2002): PE HM
purA	purA	`4155776..4155839`	`-46:+18`	CGGATTTACAATTGACTTTCTGTTTCTTCACTGATAAACTTGATTTGTTTGAATAGAATCGTTT	Mantsala P, et al. (1992): PE
purEKBCSQLFMNHD	purE	`697667..697731`	`-45:+20`	TCGATAATATCGTTGACATTATCCATGTCCGTTGTTAAGATAAACATGAAATCAAAACACGACCT	Ebbole DJ & Zalkin H (1987): S1 PE
purT	purT	`243820..243861`	`-39:+3`	AAAAATTTATTTTTCAAATATTTCAGTTATAATGGTTTGGAA	Saxild HH, et al. (1995): PE
pyrRPBCAAABKDFE	pyrR	`1617419..1617462`	`-40:+4`	ACGGTTGACAGAGGGTTTCTTTTCTGAAATAATAAACGAAGCTG	Quinn CL, et al. (1991): NB PE
qcrABC	qcrA	`2364351..2364395`	`-39:+6`	TATATTGACCTTGCTGAGAGATTCATATATTATGAGGGTGTCTAG	Yu J, et al. (1995): PE HM
rapA-phrA	rapA	`1315098..1315166`	`-50:+19`	TGCGGTTATTTTGCGTTCTTCTTTTTCTTGTAAATATGATAAAATATGACATATCTCGGGTAATTCAAA	Mueller JP, et al. (1992): PE Jarmer H, et al. (2001): PE SDM HM
rapB	rapB	`3771181..3771234`	None	TTGTAAGAAAATTTAATTCCAAAGCCATACATTATGATAAAATATAACCAATTA	Jarmer H, et al. (2001): SDM HM
rapC-phrC	rapC	`428331..428370`	`-36:+4`	GGGTTGGGACGGCCTATAAACATGATAAAATATGACATAA	Lazazzera BA, et al. (1999): PE
rapD	rapD	`3743303..3743349`	`-41:+6`	CTGTCAATGAGAGCCGTCAAAAGTTATGATATGATAATTATAGATTT	Huang X & Helmann JD (1998): PE RO RG Jarmer H, et al. (2001): HM
rapG-phrG	rapG	`4139206..4139244`	`-34:+5`	TTTTACATAAAATAGAAAGAGGTGTTACTATCAGAATAA	Hayashi K, et al. (2006): PE
rapH-phrH	rapH	`750220..750265`	`-42:+4`	CTTCCTTCTATATTGTTTTCAAAATTTGGGATTGATAGAATATGAC	Hayashi K, et al. (2006): PE
rbsRKDACB	rbsR	`3700357..3700423`	`-49:+18`	TTTGATATTTTTATTGCTAACTTCGGATTGTTCATGATAATCTATCTATGTAAACGGTTACATAAAC	O'Reilly M, et al. (1994): PE
recA	recA	`1763841..1763905`	`-45:+20`	TTCGCTTTTTTCTTGGCAAATCCCTTCAAACAGGGTATAGTATATGTAGTGGTAACATAAAGGAG	Cheo DL, et al. (1993): S1
resABCDE	resA	`2420563..2420617`	`-51:+4`	CTTCAAAAAGTAAGAAATGTGAAATGAACGTGCAATGATATAATTGAATGGATCT	Sun G, et al. (1996): PE
resABCDE	resD	`2417117..2417164`	`-43:+5`	ACACAGTTCTCAAACTTTCTCACGATTTGATAAAATGAAAGTAACAGA	Sun G, et al. (1996): PE
rpmH	rpmH	`4214428..4214499`	`-49:+23`	ACTAGTGAAGTTGACAATGAATAGGTAACGCAAATATAATAAGTAAGACTGTCTTTAACAGCTATTCCTCGA	Ogasawara N, et al. (1985): S1
rpmH	rpmH	`4214510..4214560`	`-41:+10`	AAATAAGGTTTCGAAAGTTGAAAAGGTATGGTATCCTATTATGGTTGCAAG	Ogasawara N, et al. (1985): S1
rocR	rocR	`4144692..4144740`	`-45:+4`	AAAATTCTTTTGCATATCCTCTCCGTTTTTTTATAAAATAGAAGCAATA	Gardan R, et al. (1995): PE
rpoB	rpoB	`121662..121706`	`-41:+4`	AAAGTTTGACTCGGTATTTTAACTATGTTAATATTGTAAAATGCC	Boor KJ, et al. (1995): PE SDM
ywjF-acdA-rpoE	rpoE	`3812161..3812224`	`-52:+12`	ATTAACGCTGTTAAGGGTAGCATATTCTGTTTTATTTTGTTTATAATGAGAGGTATGGTTTGTA	Lopez de Saro FJ, et al. (1999): PE
rpsD	rpsD	`3034543..3034606`	`-47:+17`	TGGAGGAATGGTTGACTTCAAAACAAATAAATTATATAATGACCTTTGTGTGAAATATTGCAGC	Grundy FJ, et al. (1990): PE
rrnA-16S-trnA-Ile-trnA-Ala-rrnA-23S-rrnA-5S	rrnA-16S	`30037..30103`	`-46:+21`	ATATTATGTATTGACTTAGACAACTGAAGGTGTTATTCTAATATACGTCGCTGATGACGAACAGCTT	Ogasawara N, et al. (1983): S1
rrnA-16S-trnA-Ile-trnA-Ala-rrnA-23S-rrnA-5S	rrnA-16S	`30121..30179`	`-45:+14`	TAAAAAGTTGTTGACAGTAGCGGCGGTAAATGTTATGATAATAAAGTCGCTTAAACGAG	Ogasawara N, et al. (1983): S1
trnB	rrnB-16S	`3177931..3177995`	`-48:+17`	TTTAAAAAACTATTGCAATAAATAAATACAGGTGTTATATTATTAAACGTCGCTGATGCACAGCG	Stewart GC, et al. (1983): S1 Estrem ST, et al. (1999): ND
trnB	rrnB-16S	`3177838..3177900`	`-43:+20`	AAAAAAGTTGTTGACAAAAAAGAAGCTGAATGTTATATTAGTAAAGCTGCTTCATTGAGAAGT	Stewart GC, et al. (1983): S1
rrnD	rrnD-16S	`945714..945776`	None	AAAAAGGTGTTGACTCTGATTCTTGACCGTGTTATATTATTAAACGTCGCTGATGCGCTTCTG	Jarvis ED, et al. (1990): HM
rrnD	rrnD-16S	`945811..945873`	None	AAAAAAACATTTGACAAAAGAAAGTCAAAATGTTATATTAATAAAGTCGCTTCAACAAGAAGT	Jarvis ED, et al. (1990): HM
rrnO-16S-trnO-Ile-trnO-Ala-rrnO-23S-rrnO-5S	rrnO-16S	`9493..9555`	`-46:+17`	TGTCATAACCCTTTACAGTCATAAAAATTATGGTATAATCATTTCTGTTGTCTTTTTAAAGAC	Ogasawara N, et al. (1983): S1
rrnO-16S-trnO-Ile-trnO-Ala-rrnO-23S-rrnO-5S	rrnO-16S	`9591..9653`	`-45:+18`	CAAAAAAGTATTGACCTAGTTAACTAAAAATGTTACTATTAAGTAGTCGCTTTGAGAGAAGCA	Ogasawara N, et al. (1983): S1
rsbRSTUVW-sigB-rsbX	rsbR	`518878..518943`	`-45:+21`	AGAGCAACTTTTTTTGTTTTCAAAAAACATAAACGATATAATAGTGAAATAACGAAAAAATATGTT	Wise AA, et al. (1995): PE
sacB-yveBA	sacB	`3534799..3534853`	`-44:+11`	ATAGACCAGTTGCAATCCAAACGAGAGTCTAATAGAATGAGGTCGAAAAGTAAAT	Shimotsu H & Henner DJ (1986): S1 Steinmetz M & Aymerich S (1986): DP, levansucrase activity
sacPA-ywdA	sacP	`3904190..3904240`	`-38:+13`	AAAAATAGTTGACGAAAACGCTATCATGATTTATGATGAAAGCGTATTCTT	Arnaud M, et al. (1996): RO
sacXY	sacX	`3940920..3940987`	`-48:+20`	CTTTTCATACTATTGCTATACAGCCATGAACAGCATAAAATGAACGTTATTACAGTTATCACCACATA	Crutz AM & Steinmetz M (1992): PE
sboAX-albABCDEFG	sboA	`3834991..3835040`	`-45:+5`	AATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAAC	Zheng G, et al. (2000): PE
yaaJ-scr	scr	`26335..26387`	`-42:+11`	GTACGGTTGCAATTTTTAGGGGAAACAGATATACTTAAGTGTGCATCGTAATA	Struck JC, et al. (1989): S1
sda	sda	`2646553..2646599`	`-42:+5`	AGAACGATTGTTCTTATATGCATTTCATGGTAGATTAAAGATAACTT	Burkholder WF, et al. (2001): PE RG
yaaJ-scr	yaaJ	`25762..25805`	None	CAATCGACAGTCTCCTTTCCGTTTCAGTTATAGTTAATATGTAG	Struck JC, et al. (1990): RG HM
sdhCAB	sdhC	`2907879..2907940`	`-44:+18`	CGCGTTTTCTTGACGCCCTTTTGAGGGAGGAGTAAAATGAAATTGTCAATAAATCTTAATAA	Melin L, et al. (1989): PE
sdpRI	yvbA	`3466408..3466452`	`-37:+8`	GGGTTGTTTTTAAAAAAATTCAAGTTATAATGAAAATAATACATT	Ellermeier CD, et al. (2006): PE
secA-prfB	secA	`3629928..3629980`	`-42:+11`	CAAATTCTTTGGAAATAACAAAAGGTATGATATGATAATGAGAGGTATACATG	Herbort M, et al. (1999): PE RG, Western blotting
fla-che	sigD	`1715726..1715776`	`-44:+7`	ATATTCGAACTGTTAAACAAGGTGAAAAAACGATTTAATTAAGGTATTAGG	Allmansberger R (1997): PE DP
sigH	sigH	`116527..116589`	`-45:+18`	TAGATTAAGTTGACGCTTTTTTGCCCAATACTGTATAATATTTCTATCTACGTGCGCCGGGGG	Weir J, et al. (1991): PE
sigM-yhdLK	sigM	`1029467..1029513`	`-42:+4`	CTCCGCACTATCTTTTGCGGCCATTTTTGGGTACTATATAGTAATGG	Horsburgh MJ & Moir A (1999): PE NB RG
sigX-rsiX	sigX	`2414453..2414496`	`-40:+4`	TTCCCTTCCAAATTCCAGTTACTCGTAATATAGTTGTAATGTAA	Huang X, et al. (1997): RO PE RG Huang X & Helmann JD (1998): PE
sinIR	sinI	`2551503..2551562`	`-53:+7`	ACCATTCGACATCATTCTCGTTTTTTTTGAGAAAATACGATTATAATAAAGGTATATTGG	Gaur NK, et al. (1988): PE HM Shafikhani SH, et al. (2002): PE
sinIR	sinI	`2551584..2551629`	`-41:+5`	TGGCAAATGACTTCCAGAGACTAATGAAGCATACAATAAGTCATGG	Gaur NK, et al. (1988): PE HM
sinIR	sinR	`2551821..2551880`	`-49:+11`	AGCCAGAAGTCATACCGTAAATCCTTTCTGAATGTGCTATAATATCACAAGGAAGGTGAT	Gaur NK, et al. (1988): PE HM Shafikhani SH, et al. (2002): PE
gapB-speD	speD	`2965967..2966012`	`-40:+6`	GCACCTTGCAAATTAGACTTAAACACAGTATACTATTTTTCGTGAA	Sekowska A, et al. (2000): PE NB
spo0A	spo0A	`2518244..2518301`	`-43:+15`	CCCTCTTCACTTCTCAGAATACATACGGTAAAATATACAAAAGAAGATTTTTCGACAA	Chibazakura T, et al. (1991): S1 Eymann C, et al. (2001): NB
spo0A	spo0A	`2518253..2518306`	`-42:+12`	TTGATCCCTCTTCACTTCTCAGAATACATACGGTAAAATATACAAAAGAAGATT	Predich M, et al. (1992): PE Eymann C, et al. (2001): NB
spo0B-obg	spo0B	`2853821..2853887`	`-50:+17`	GGAAAAACAATTGTTTTTCTAACAAAGCCTTCTCTGTTATAATTCATAATACACACTTATACAGACT	Trach K, et al. (1989): S1
spo0E	spo0E	`1429895..1429959`	`-49:+16`	AATGAAAATATGTTTACAAATAAAGTATAATCTGTAATAATGCACAATAACCCAATCAAACTTGT	Perego M, et al. (1991): PE
spo0F	spo0F	`3809002..3809065`	`-44:+20`	GAAAATGCTCAGAAAATGTCGTAAAGTAGACTATTATAATTAAAGGAAATAGGAAAATCAAACA	Trach K, et al. (1988): S1 Lewandoski M, et al. (1986): S1
spoIIE	spoIIE	`70456..70522`	`-51:+16`	TTACCTTCTTTTGACAAAATCCTATCTGTGCTTTCGCTATAATGACAGGCAACGAATATAACAGGTG	York K, et al. (1992): PE Guzman P, et al. (1988): S1 DP RG
spoIIGA-sigE-sigG	spoIIGA	`1602982..1603049`	`-49:+19`	TCAACATTAATTGACAGACTTTCCCACAGAGCTTGCTTTATACTTATGAAGCAAGAAGGGGAACAGCG	Kenney TJ, et al. (1989): PE
spoIIIE	spoIIIE	`1751444..1751487`	`-41:+3`	CCAACCCTTTTTTAAGGGCAAAATATGCTATAATAGGGGAATCC	Foulger D & Errington J (1989): PE RG
srfAA-srfAB-comS-srfAC-srfAD	srfAA	`376189..376251`	`-46:+17`	CCATTTTTCGGTGATAAAAACATTTTTTTCATTTAAACTGAACGGTAGAAAGATAAAAAATAT	Nakano MM, et al. (1991): PE
tagAB	tagA	`3680283..3680329`	`-42:+5`	TAATGTTAATCCTTTGTTGAAGATTTATGTTAAAATATAAGGTAGCT	Mauel C, et al. (1995): PE
tagDEF	tagD	`3680116..3680161`	`-40:+6`	AGTACTTAACCTTTTTTAGGCGGTATGCTATAATTAATGATCAGTG	Mauel C, et al. (1995): PE
tetLB	tetL	`4188183..4188245`	`-45:+18`	AAAGTAAAAGTTTAATCCTTAGTCTATATATAATAAGATCATATCAATCAAATGTAGGGGGAG	Sakaguchi R, et al. (1988): S1
thrS	thrS	`2960515..2960576`	`-42:+20`	GCGATCGTGTTGATTTTTTGGATTGAACAATTTATAATACATAGGAGATTAAGAAAGACACA	Gendron N, et al. (1994): PE RO
thrZ-ywhA	thrZ	`3855997..3856034`	None	CTGATTGCGCTTTGTGGGAATATATAGTAAGATATAAA	Putzer H, et al. (1992): NB DP, Western blot
trePAR	treP	`849619..849660`	`-38:+4`	GTGTTGACTACCTGTATATACAGGAATACAATATGATTATAA	Schock F & Dahl MK (1996): PE
rrnD	trnD-Asn	`950737..950787`	`-39:+12`	AACACTTGATTTTCTCAAGAATACATAGTATAATGTTAAATGTCACTGAAA	Vold BS, et al. (1988): S1
rrnD	trnD-Leu2	`952472..952531`	`-47:+13`	TTTTTTGAAATACGTTGACACTTTATGAGATCCATGATATATTTATATTCGTCGGTTAGA	Vold BS, et al. (1988): S1
trpEDCFBA-hisC-tyrA-aroE	trpE	`2376811..2376865`	`-47:+8`	CCGATTTATCATTGACAAAAAATACTGAATTGTAATACGATAAGAACAGCTTAGA	Shimotsu H & Henner DJ (1984): S1 DP RG Shimotsu H, et al. (1986): S1
trxA	trxA	`2912417..2912473`	`-37:+20`	AAAATAGCGTGAACGAATGGGAGATGCTATACTAAAAATCATCATTTCACATTGGAG	Scharf C, et al. (1998): PE, 2D-gel
tyrS	tyrS	`3037193..3037253`	`-43:+18`	AGGCGGCGTTGACACAGGATTTTATTTATGTTAAAAATGATATAGCTTCATATGAAAAGGT	Henkin TM, et al. (1992): PE
ureABC	ureA	`3768962..3769007`	`-38:+8`	TTCTTTGAATTAATAGGCCTCTTCTATATAATGATGACATAAGTTG	Wray LV Jr, et al. (1997): PE RG
valS-folC	valS	`2868837..2868887`	`-43:+8`	AGATGATTGACGAATCAAAAACACTTTTACTATAATAAAGAACATAAATAA	Luo D, et al. (1997): PE NB
veg	veg	`52702..52763`	`-44:+18`	AAATTTTATTTGACAAAAATGGGCTCGTGTTGTACAATAAATGTAGTGAGGTGGATGCAATG	Whipple FW, et al. (1992): RO FT Le Grice SF & Sonenshein AL (1982): FT NB Moran CP Jr, et al. (1982): RO, in-vitro transcription Fukushima T, et al. (2003): PE NB RG
wapA-yxxG	wapA	`4029598..4029641`	`-40:+4`	AAATATTGTAATGATATTTCAGTCTAGTTAAGATTATTGAGTAA	Dartois V, et al. (1998): PE RG
xpt-pbuX	xpt	`2319403..2319447`	`-40:+5`	CAGCCTATGCAAGAGATTAGAATCTTGATATAATTTATTACAATA	Christiansen LC, et al. (1997): PE HM
xsa	xsa	`2914307..2914353`	`-38:+9`	GTCGTTGACATGTACGAACATATATAATATGGTTACTTTAAAAGCGC	Raposo MP, et al. (2004): RG PE
xylAB	xylA	`1890968..1891029`	`-44:+18`	CTAAAAAAAATATTGAAAATACTGACGAGGTTATATAAGATGAAAATAAGTTAGTTTGTTTA	Hastrup S (1988): Genetics and biotechnology of Bacilli, vol.2 p.79-83: S1 Gartner D, et al. (1988): S1
xynA	xynA	`2054538..2054597`	`-49:+11`	ATTACAAATACTTTTAATATTTGCTCATGAATTCGTGGTATTATACTGAAGGGGACGATC	Allmansberger R (1996): PE NB
xynPB	xynP	`1886192..1886249`	`-47:+11`	CTGAAAAAGATGTTGAAAAAGTCGAAAGGATTTTATAATATTAAGTCAAGTTAGTTTG	Hastrup S (1988): Genetics and biotechnology of Bacilli, vol.2 p.79-83: S1 Galinier A, et al. (1999): PE DP
yaaA-recF-yaaB-gyrB	yaaA	`3139..3190`	`-41:+11`	CCCTTTCCCTAATTCGTTTTTTTTTAGTACAATTAGATATTAGTGATATTTG	Ogasawara N, et al. (1985): S1
yaaA-recF-yaaB-gyrB	yaaB	`3599..3668`	`-51:+19`	TCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAA	Ogasawara N, et al. (1985): S1
skf	ybcO	`213809..213876`	`-64:+4`	AATTTTTAGGATAATATACAAAATCCCCCTTACTTCGACAATTGCAATCTGGTATTATCGTATCGCAT	Chen G, et al. (2006): PE
yccC	yccC	`290400..290445`	`-40:+6`	GATCTTTTGACTGAATAGATAAAATGTACAATGATTAATCATCATA	Fisher SH & Wray LV Jr (2002): PE
ycdHI-yceA	ycdH	`307781..307857`	`-43:+34`	ATTTATTCTTGCAAAACGTAATGACTTCGGTTTATTATGATATAGGATTACAAAATCGTTATCATTTTGATTTAAAG	Gaballa A, et al. (2002): PE
yceCDEFGH	yceC	`311574..311620`	`-45:+2`	TCGTCAATTATTCTTAACTTTTACGAAACTTTGATATAATAACAAAC	Cao M, et al. (2002): PE
yciABC	yciA	`363737..363801`	`-40:+25`	TTTCTCTTGATTTTCAACAGTGAACCGATCAAAATAAATAGTAATTATTACGATTTGTTAGTGAG	Gaballa A, et al. (2002): PE
yciABC	yciC	`365318..365389`	`-43:+29`	AAAACCGTTGACAAAAAGGAAAAAAGACCATACAATTTAAGTCGTAACAATTACGTTTTATGATAAATGGCT	Gaballa A, et al. (2002): PE
rtpA-ycbK	yczA	`276749..276793`	`-40:+5`	AGAATTGACTTCGTTTCATGAACCGAGTATTATAAACTCTACAAA	Sarsero JP, et al. (2000): PE
ydfK	ydfK	`593664..593708`	`-41:+4`	TCCCTTGACTCTCTACTAACTAGAGGGTTTATTTTTTATGCAGGA	Baranova NN, et al. (1999): RO
yfkJIH	yfkJ	`861245..861296`	`-44:+8`	GACATCAGTTGAAAAGAAAATGAACATCCTACTAAGATATTCATGAAGGTTT	Price CW, et al. (2001): RACE-PCR
yfmPO	yfmP	`811412..811457`	`-41:+5`	TTAACGTTTACGTTAAGGTTCAAAAGGTGTATAATGGTAACAGAAA	Gaballa A, et al. (2002): PE
yhaG	yhaG	`1074533..1074593`	`-42:+19`	AAAGTCTGGCTATGCAAACCGTCCGTTTGGTATACTGTTTGCATAACACATTCTGTAAAGC	Sarsero JP, et al. (2000): PE
yhfL	yhfL	`1100192..1100273`	`-38:+44`	GCTCTTGAGTGTTTTTTTCTGTTTCTCTATAATGGAGAAGAAAGCTTGGCTTCAATAATGAATGACTATTCATTCACTTAAG	Matsuoka H, et al. (2006): PE NB
yjcIJ	yjcI	`1257554..1257600`	`-40:+7`	AAGTGTTGAAATAAACTGTGAATTGCGCTAATATAAAACAATCAGAA	Auger S, et al. (2002): PE
uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA	uxaC	`1299668..1299715`	`-39:+9`	GAGATTGATCCCAAAGGAATATAAAGGTAAAATAAAAACAAATCAAAA	Mekjian KR, et al. (1999): PE SDM RG
yklA	yklA	`1380207..1380262`	`-50:+6`	TTTATACGCGAAAAATTGACATTTCAAATTTAATTGTGTACAATTTAATTGTATAA	Volker U, et al. (1998): PE HM
ykzB-ykoL	ykoL	`1397422..1397465`	`-39:+5`	ATTCATACCACGTTCATTTAAAAAGAGTATCTTTTGTATAGGAT	Robichon D, et al. (2000): NB PE
ykuFG	ykuF	`1477302..1477364`	`-36:+27`	TGTGCTGACAGAGGCAGGGATATAATGATAGAATATTATTGAATGAATAATCATTCACAATTG	Matsuoka H, et al. (2006): PE NB
ykuNOP	ykuN	`1486259..1486307`	`-44:+5`	ATTTATCTGTTGACAATGAAAATCATTATCATTTAAAGTGATACATATG	Baichoo N, et al. (2002): HM PE
ykvW	ykvW	`1450534..1450577`	`-38:+6`	ATAATTGAAATTCTCTTCGTGCGTGCTATAATAAAGGAAGACAT	Gaballa A & Helmann JD (2002): PE HB
ylaABCD	ylaC	`1543353..1543403`	`-41:+10`	TTTATTGGCCATTTGGATGACGGTGTGGTTTTATTTTTAATGAAGCATAGG	Matsumoto T, et al. (2005): NB PE RACE-PCR
ylxM-ffh	ylxM	`1671046..1671107`	`-45:+17`	GATAAAAACTTGACAGTGTCATTAAAACCGTGTAAACTAAGTTATCGTAAAGGGATTTGACT	Honda K, et al. (1993): PE
nrdIEF-ymaB	ymaA	`1867718..1867772`	`-46:+9`	CGAATCTATATATTGTGTTTTTGCTAGAGGGTAGTATACTATATATAGTGTTAGT	Hartig E, et al. (2006): PE
ccdA-yneIJ	yneI	`1923164..1923210`	`-42:+5`	TCGTACTACTACTAATCCTTTTGTTTTTGGTACAATAAGACTATTAT	Schiott T & Hederstedt L (2000): PE NB
ccdA-yneIJ	yneJ	`1923614..1923660`	`-42:+5`	TCAAAATGGTTTTTTTTATTGTTTTGGAGTATAGTATATAGTATCAA	Schiott T & Hederstedt L (2000): PE NB
yocH	yocH	`2093009..2093057`	`-44:+5`	TTTTTGTTATTGATTTGACATTTACGTGTGTTACGATATCACCTGTTAG	Howell A, et al. (2003): PE
ypuE-ribDEAHT	ypuE	`2430822..2430873`	`-43:+9`	TATTTCATTGCGTACTTTAAAAAGGATCGCTATAATAACCAATAAGGACAAA	Mironov VN, et al. (1994): NB S1 Perkins JB, et al. (1999): RG NB
txpA	yqdB	`2677372..2677432`	`-50:+11`	TCATACTTTTTGAATGTGCTTTCCATATAATTCATGTATAATAGATTCTTGAAGCTACCTT	Silvaggi JM, et al. (2005): PE NB
yqxD-dnaG-sigA	yqxD	`2603255..2603301`	`-42:+5`	AACAATAGCATCTTTGTGAAGTTTGTATTATAATAAAAAATTGTGAT	Wang LF, et al. (1987): S1
yqxD-dnaG-sigA	yqxD	`2603283..2603328`	`-42:+4`	TGGCTGTGCCAAAAGGGAATAATGAAAAACAATAGCATCTTTGTGA	Wang LF, et al. (1987): S1
lcfA-ysiAB-etfBA	ysiA	`2917630..2917696`	`-43:+24`	GAATAAACTTGACAAACCTGAAAATCCTTCTTATCATGAAATTATGAATGAATAGTCATTCATTTCT	Matsuoka H, et al. (2006): PE NB
ytkD	ytkD	`3134535..3134579`	`-40:+5`	AAAGGCTTCCGAAGAAACGTAACTGTGGTATGATGTATGGAAGAT	Ramirez MI, et al. (2004): PE NB RT-PCR
ytrABCDEF	ytrA	`3118527..3118573`	`-41:+6`	AAAGGATTGACTTTGTGAGTCAAAGTATTTATTGTATTAAGTGTACT	Yoshida KI, et al. (2000): NB PE
yusMLKJ	yusL	`3371437..3371529`	`-38:+56`	CTATTGAAGTCGAACCGGAAATCTTTTAAGATGAAAGAAGAAACGGGTTTCATTTTTTTTAGTCAAAAAATGAATGACTATTCATTCAATGTT	Matsuoka H, et al. (2006): PE NB
yuxH	yuxH	`3258327..3258392`	`-49:+17`	TTTTCATGTTTAGACAATTTTCGTCAAATTATTTGATATACTTAGGGGTGAAAGCCGCGCGTATTG	Weinrauch Y, et al. (1989): PE
eps	yveK	`3528936..3528985`	`-43:+6`	TTTTGCAATTTTTAAATAATAACGTTTTCTTTTATAATCCAATCATTAAC	Kearns DB, et al. (2005): PE
yvgRQ	yvgR	`3433226..3433270`	`-40:+5`	TATATTTTACTTAAGCCTAGTATTCCGGTAAAGTTCAATTAGATG	Guillouard I, et al. (2002): PE
ywbI-thiME	ywbI	`3932165..3932213`	`-40:+9`	TACTTATTGTACATAAGGTCTCTCTATAGGTAAAATATATATTAAGAAT	Zhang Y, et al. (1997): PE NB
ywcJ	ywcJ	`3904288..3904337`	`-42:+9`	TAATTGTGAAATACTTCACAATATCGTGCCATACTATGCTCAATCATGAA	Cruz Ramos H, et al. (1995): PE Reents H, et al. (2006): PE
ywfK	ywfK	`3864273..3864315`	`-39:+4`	CCTTCTTTACCAAGACGGATGATATGAGTACAATAAAGAAAAC	Guillouard I, et al. (2002): PE
ywjF-acdA-rpoE	ywjF	`3815580..3815622`	`-37:+6`	TATTGACTGAACACTCATTCATTATTTATCATAAAGATAATCT	Matsuoka H, et al. (2006): PE NB
pyrG	pyrG	`3811495..3811547`	`-45:+8`	AAAACGATCTTGACTTTCATAGTCGAACTATGTAGTATGTATTTTGGGCTCTT	Meng Q, et al. (2004): PE
yqxM-sipW-tasA	yqxM	`2554536..2554581`	`-42:+4`	GGTGTTTTTAAATCTATAAATCGTTGATTATACTCTATTTGTGAAG	Chu F, et al. (2006): PE
ezrA	ezrA	`3030537..3030614`	`-58:+20`	GCACAAAAAGTTTTTGATTTCTGGTCAAAAAATGTTTGTTACATGGTATCATAATAACAATGAAAACGACAGTTTTTC	Chung KM, et al. (2004): PE RG
ezrA	ezrA	`3030512..3030586`	`-55:+20`	AAAATGTTTGTTACATGGTATCATAATAACAATGAAAACGACAGTTTTTCTCAATACATATCCTGAAATCTTTCT	Chung KM, et al. (2004): PE RG
yxeKLMNOPQ	yxeK	`4061231..4061297`	`-58:+10`	AGAAAAAATTAATCTTAACTCATTGACAAACGTCCAAGACAAAGGTACATTTTGATTTATTCATATT	Auger S (2003): Thesis: PE Even S, et al. (2006): PE
yrrT-mtn-yrhABC	yrrT	`2787764..2787832`	`-59:+10`	ATAAAATACACAAAGTGTTTTAGTACCTGCTTTTCAGAATATGTGGTATTATAGGAACTGTTCCATCAT	Auger S (2003): Thesis: PE Even S, et al. (2006): PE
yhcL	yhcL	`986242..986307`	`-53:+13`	GTTAAAATAATTCGCACTTGACCCATCGGAATTAGTGTAATATAGTAAATGAGAAAATTTGAAGGG	Auger S (2003): Thesis: PE Even S, et al. (2006): PE
ssuBACD-ygaN	ssuB	`960560..960621`	`-47:+15`	ATTTAAAAAAGAGTTGACATATCGGAATAATTTGAATTAACATGTTATTCAAACAAAAAAAC	Van der Ploeg JR, et al. (2001): PE
cymR-yrvO-trmU	yrzC	`2811433..2811491`	`-50:+10`	CCTTCTGCCTCAATGAAAATTCGCTGAAGGTATGTTATAATAACAGTTGGTCTATAAGA	Choi SY, et al. (2006): PE
yjbCD	yjbD	`1226883..1226941`	`-50:+10`	TTTTCTTAGGATACTGTTCACACTTACTTTTTTATAGTATAATACCTGTAAAGATTCCT	Leelakriangsak M, et al. (2007): PE
ntdABC-glcP	yhjL	`1128949..1129008`	`-50:+10`	CTTAAAAAAGTTGTTGACATGTTACCGATTTCAGAAACTAGGATAAATTTGTAATAAATT	Inaoka T, et al. (2004): PE
lytE	lytE	`1018179..1018224`	`-38:+8`	GACTATTTCTGATGGGAATCTATCCTTATAATAGAAATCAAATAAG	Ishikawa S, et al. (1998): PE
narK-fnr	fnr	`3831262..3831327`	`-48:+18`	TTAGTTTTTTCTCGATGGGTACAAATCAATTCACGTTACAATAAACACACAACGTGACTTTCTTCG	Cruz Ramos H, et al. (1995): PE
hmp	hmp	`1372008..1372068`	`-50:+11`	GATTCATTTTAGATATATCTTTTATTCGTAAGATCATGTATTTTAAAGATATATTTTAAAT	LaCelle M, et al. (1996): PE DP RG Nakano MM, et al. (2006): PE
narK-fnr	narK	`3832561..3832620`	`-52:+8`	ACGTGTGATGTAATTCACAATCCTGTTTGGCTAGTTTTTGTATGATAAGACTGATTATTG	Cruz Ramos H, et al. (1995): PE
phoD	phoD	`283482..283531`	`-44:+6`	CACTTCTTCACAGTCGTTTAACAATGATTTCCTATAATGGAGACGATCAA	Eder S, et al. (1999): PE
rnc-smc-ftsY	rnc	ND	ND	ND	Kakeshita H, et al. (2000): NB
sipS	sipS	`2432802..2432850`	`-40:+9`	ACCAAGCTGAGAAACGAACCCAATTAGTATGTAATCAAAATTAAGTAAA	Bolhuis A, et al. (1996): PE NB RG
spoIIIJ-jag	spoIIIJ	`4213671..4213722`	`-44:+8`	GAAAAAGACACCATTTAAAACTGAAAGATGCTAAAATACATACAAGTATGCT	Errington J, et al. (1992): PE RG
tuaABCDEFGH	tuaA	`3657962..3658011`	`-44:+6`	ATACCATTTACATCCAATTAACATCCGTCTGCTAAACTGACTGGCATAGG	Soldo B, et al. (1999): PE
ywkAB	ywkA	`3801258..3801317`	`-49:+11`	GTAATTTTCTTCTCTTGAATTTTGATTTTGACAGGCATACAATAGCTTACGTAATGTAAA	Doan T, et al. (2003): PE
mtnU	ykrU	`1424870..1424939`	`-55:+15`	CCTTCTAAAAAAATCTTGAAATGATAGTCCATCATCATATATGGTTAAATGAAAAAAGTAAAGAAAAATT	Sekowska A & Danchin A (2002): PE
mtnV	ykrV	`1424868..1424937`	`-47:+23`	CAAATTTTTCTTTACTTTTTTCATTTAACCATATATGATGATGGACTATCATTTCAAGATTTTTTTAGAA	Sekowska A & Danchin A (2002): PE
mtnKA	ykrT	`1424010..1424078`	`-49:+20`	TTAAAAAATATATTGACAACTAACTAAATTACCTGTTACCATGTTCATCAACTGATAAATTAGAATTGT	Sekowska A & Danchin A (2002): PE
mtnWXBD	ykrW	`1426115..1426190`	`-50:+26`	TACCCAAAAAAGCATTGACAAGACCTTATAACGATGGGATAATTCAAAATAATTTATAAAATCTATATTTTCTTAT	Sekowska A & Danchin A (2002): PE
mtnWXBD	ykrW	`1426131..1426194`	`-53:+11`	GACAAGACCTTATAACGATGGGATAATTCAAAATAATTTATAAAATCTATATTTTCTTATCAAG	Sekowska A & Danchin A (2002): PE
ytmIJKLMNO-ytnIJ-ribR-ytnLM	ytmI	`3007861..3007935`	`-55:+20`	AAGGTTTACTTTTTTTGATTAGTCAAAGATCAGAGTATGCTTTATAGTATAAACAATAAAAGCTTAGTAAACAAA	Burguiere P, et al. (2005): PE Erwin KN, et al. (2005): PE Solovieva IM, et al. (2004): NB
ytlI	ytlI	`3007845..3007918`	`-54:+20`	AAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATACTATAAAGCATACTCTGATCTTTGACTAAT	Burguiere P, et al. (2005): PE
ytlI	ytlI	`3007845..3007918`	`-51:+23`	AAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATACTATAAAGCATACTCTGATCTTTGACTAAT	Erwin KN, et al. (2005): PE
speE-speB	speE	`3848712..3848776`	`-53:+12`	CAGAACAGGACGCATCTTTACTTTTTCCCCGCCATCCTCTATACTTTTTCCTTAGGTGAAAATGA	Sekowska A, et al. (1998): PE
yflG-yflH	yflG	`839822..839907`	`-55:+31`	TTTTCCCAGGTCCGTGTGTTTCCTATTTTTAAGACAGTTGTGGTAAGCTTAATCTAGATTATTTAAAAAGAAAGCGGGAATGACAG	You C, et al. (2005): PE
ydfJ	ydfJ	`589175..589238`	`-50:+14`	CATGCCCGAATGTACGTTTTTTTCATTTCATTGTCAACTACAATGAGAAAGAATGTGATCAAGC	Serizawa M, et al. (2005): PE