 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | arsR-yqcK-arsBC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| arsR | yqcJ | - | 2656543..2656860 | transcriptional regulator (ArsR family) | COG0640 | arsR-1-STA arsR-BAC x1277-BAC x1447-BAC x1694-BAC |
| yqcK | - | 2656042..2656482 | COG0346 | x1225-BAC | ||
| arsB | yqcL | - | 2654979..2656019 | membrane-associated protein | COG0798 | acr3-BAC |
| arsC | yqcM | - | 2654548..2654967 | arsenate reductase | COG0394 | arsC-BAC arsC-STA |
| Operon evidence: | Northern blotting (2.4 kb transcript) |
|---|---|
| Reference: | Sato T & Kobayashi Y (1998) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ArsR | Negative | -56:-39 | 2656932..2656949 | AAATAAATTGATTTATTT |
Sato T & Kobayashi Y (1998): DB |
| SigA | Promoter | -39:+5 | 2656889..2656932 | TGCTTGCATTATTTTAAAAATCATGAGTATAATAAATACATCAA |
Sato T & Kobayashi Y (1998): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTAAAGGATGCATATTTATATGTGTCCTTTTTTTATTAATGT >>>>>>>>> <<<<<<<<< |
arsC |
|