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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | citR |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| citR | - | 1019330..1020256 | transcriptional regulator (LysR family) | COG0583 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Jin S & Sonenshein AL (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -46:+19 | 1020291..1020355 | CCCTATCCTTTTCTGTTATTATAGTAAATATAATATTTAAAAAATAATCAATATTTTAAAGGGAA |
Jin S, et al. (1994): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCCGTTCCAATGAACGGGTTTTCTCTAAAAATT >>>>>>> <<<<<<< |
citR |
|