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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | cwlH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| cwlH | yqeE | - | 2648126..2648878 | N-acetylmuramoyl-L-alanine amidase | COG3409 |
| Operon evidence: | Northern blotting (0.8 kb transcript) |
|---|---|
| Reference: | Nugroho FA, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| GerE | Positive | -160:-140 | 2649031..2649051 | CCCAACTTAGGTGATGTCAGG |
Nugroho FA, et al. (1999): RG PE HM |
| SigK | Promoter | -40:+14 | 2648879..2648932 | AAAGGCTGTCCATCTCTCTGTTTTCTGCATTCTTATTAATAGGGAGGGATAGAA |
Nugroho FA, et al. (1999): RG PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ACGGATAACCTGTTTCCAGTGCGGATTCAGGTTATTTTCTTTTCTTTGG >>>>>>>>>>>> <<<<<<<<<<<< |
cwlH |
|