Regulated Operon: des

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
des yocE + 2088607..2089665 fatty acid desaturase COG3239 x0608-BAC  

Operon evidence: Northern blotting (1.1 kb transcript)
Reference: Aguilar PS, et al. (1999)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
YocG Negative -61:-45 2088518..2088534 TCATATAGGAGGCATGA Aguilar PS, et al. (2001): GS FT
SigA Promoter -43:+5 2088536..2088583 GTGTGCTACTACAAAAGACTTCTCTCATTAGCGTATACTGAACCGAGA Aguilar PS, et al. (1999): PE HM

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
ATAAAGGAGGTCTTCTAATATACTAGAAGGCTTCCTTTTTATTGTTGGAG
     >>>>>>>>>>>>      <<<<<<<<<<<<
2089673..2089702
8..37
-18.9
 des

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai