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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | galE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| galE | - | 3988967..3989986 | UDP-glucose 4-epimerase | COG1087 | galE-BAC galE-CLO galE-LAB |
| Operon evidence: | Northern blotting (1.2 kb transcript); downstream gene is on the opposite strand |
|---|---|
| Reference: | Yoshida K, et al. (2000), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -41:+8 | 3990006..3990054 | AAATGGATGTGGACCGGTTCTAAACACTATATAATGAAAACAGGTCATT |
Krispin O, et al. (1998): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ATGGAGGCCTTCTCAATTGAGAAGGCCTTTTTTAAAGAACAA >>>>>>>>> <<<<<<<<< |
galE |
|