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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | gerD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| gerD | - | 158514..159071 | gerD-BAC |
| Operon evidence: | upstream and downstream genes are transcribed in the opposite direction |
|---|---|
| Reference: | Yon JR, et al. (1989) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+20 | 159080..159138 | GTTATGTATAATTCCAAACAGATGAATCATATTAAAGGTAAGACAAGTATGTGAAAGGA |
Kemp EH, et al. (1991): RG DB OV PE RO |
| SpoVT | Positive | ND | ND | ND |
Bagyan I, et al. (1996): DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ATAAAGGGAAAGCCGGGATCTGGAATCCCGGTTCACCTTTTATACCTGCACT >>>>>>>>>>>>>> <<<<<<<<<<<<< |
gerD |
|