Transcription factor: SigG

Factor type	ND
SWISS-PROT	P19940
SubtiList	BG10236
Consensus seq.	GHATR(-35), GG-CATXHTA(-10)
Comment	RNA polymerase sporulation-specific sigma factor (Sigma G). Control of transcription in the forespore at late stages of sporulation. Null mutations prevent activation of Sigma K. Inactive in a spoIIIA mutant.
Link to	Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs

Operon	Regulated Gene	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
csbX-bofC	bofC	`2836668..2836714`	`-42:+5`	ATAAAACGGTTAAGCAGTAGCCTCTTTGGTCAAACTAATCATAAACG	Gomez M & Cutting SM (1997): PE RG
csgA-ybxH	csgA	`227980..228033`	None	ATTTTTCGCGTATGGATTTTCCCTATTTTAGCAAGCTATAGGGTAAAGATAGCA	Shchepetov M, et al. (1997): DB RG
dacF-spoIIAAB-sigF	dacF	`2445475..2445514`	`-37:+3`	GGCGTATAAAACCATCACGCTTGGAAAAAATAAAAAGGAT	Schuch R & Piggot PJ (1994): DB RG OV
exoA-ccpB	exoA	ND	ND	ND	Salas-Pacheco JM, et al. (2005): NB RG DB
gerAABC	gerAA	`3389741..3389781`	`-39:+2`	CACAGTATATCATTTTTTTAACAGGAAAAGATAACCTCTAC	Feavers IM, et al. (1990): RG PE
gerBABC	gerBA	`3687763..3687816`	`-43:+11`	TTTTCCTCGATAAGAATAATTCTCCTTTTTTGATACAAATTAATAAAAACCGTC	Corfe BM, et al. (1994): PE
gerD	gerD	`159080..159138`	`-39:+20`	GTTATGTATAATTCCAAACAGATGAATCATATTAAAGGTAAGACAAGTATGTGAAAGGA	Kemp EH, et al. (1991): RG DB OV PE RO
gerKACB	gerKA	`419615..419668`	`-42:+12`	TAATGCATAATCTCAATTTTAAAAGGAAGAATATGAGAAAACGACAAGGAAAGG	Igarashi T & Setlow P (2006): 5'-RACE-PCR, RT-PCR, DB OV DP
glcU-gdh	glcU	`443958..444004`	`-40:+7`	TTCCGGCGAATAATCACAACAATTCCAGCCAAAATAACAGCAAATAC	Rather PN & Moran CP Jr (1988): PE, promoter mutation
gpr	gpr	`2634856..2634897`	`-39:+3`	TTTAGCATGATTTATTCAGCAAATGGCAACAATATAGGTACT	Sussman MD & Setlow P (1991): RG PE DB OV, in-vitro transcription
rsfA	rsfA	ND	ND	ND	Juan Wu L, et al. (2000): RG DB OV
spoIIGA-sigE-sigG	sigG	`1604857..1604915`	`-40:+19`	GCAGTGCATATTTTTCCCACCCAAGGAGATACTTAACGTTGTACAGCAGCTCCTGTAGG	Sun DX, et al. (1991): PE RG
sleB-ypeB	sleB	`2399295..2399341`	`-41:+6`	AAAGAGTGTATAAAAATAACCTCGTTACAGAAAATACGATTACACTT	Moriyama R, et al. (1999): NB PE HB DB
splAB	splA	`1460706..1460749`	`-40:+4`	TTTTTTTCATAAGTAAGGGTATAGAAGGACACAATAACATGGCT	Pedraza-Reyes M, et al. (1994): RG DB OV PE RO Pedraza-Reyes M, et al. (1997): SDM RG
splAB	splB	`1461014..1461058`	`-41:+4`	TACAACTCATATCCTTTCCGCCTAGTGAGAAAAGTAACGTTAGTA	Pedraza-Reyes M, et al. (1994): RG DB OV PE Pedraza-Reyes M, et al. (1997): DB RG OV
spoIVB	spoIVB	`2519667..2519708`	`-39:+3`	CAGTTATAAATAAGCCGTCAGAAGGCAAAATTAAATGATGTA	Gomez M, et al. (1996): PE DB RG
spoVAABCDEF-lysA	spoVAA	`2442500..2442557`	`-37:+21`	GATGAATGAGAACAAAATCGAACCACATACTACATATATAACCACCGAAAGATGGTGA	Moldover B, et al. (1991): PE Sun DX, et al. (1989): DB RG
spoVT	spoVT	`63977..64016`	`-37:+3`	GGTGTATATTACATTTGATGTGACGGATACTAATTTCAAG	Bagyan I, et al. (1996): RG DB OV PE
sspA	sspA	`3024699..3024749`	`-39:+12`	TTCTGAATGAAGCCATGTGTTTTGACACATTCTATACTCACAAGGAGGTGA	Nicholson WL, et al. (1989): PE RO, nuclease protection
sspB	sspB	`1049652..1049698`	`-40:+7`	CTCCGCATGATTTTCCGGCCATTTTAACATAATACGTAGTAACAAGC	Fajardo-Cavazos P, et al. (1991): PE, promoter mutations, RG Nicholson WL, et al. (1989): PE RO
sspC	sspC	`2155358..2155403`	`-39:+7`	GCGTGTATAAATTAAAATAATCTCTCCATAATATGATTCAAACAAG	Nicholson WL, et al. (1989): nuclease protection, RO
sspD	sspD	`1413334..1413380`	`-39:+8`	GCCAGCATAAATAAACCCCGTATATTTCAAACTAAATACGCGTTAAG	Nicholson WL, et al. (1989): nuclease protection, RO
yfhQ-fabL-sspE	sspE	`937180..937229`	`-40:+10`	AGAGGAATAGCTATACGATCACCTGCACATTCTAATGACCGTGGAGGTGA	Fajardo-Cavazos P, et al. (1991): PE, promoter mutations, RG Nicholson WL, et al. (1989): PE, nuclease protection, RO Sun DX, et al. (1989): RO, nuclease protection, SDS-PAGE, RG, RNAP purification, in-vitro transcription
sspF	sspF	`53081..53131`	`-39:+12`	TTTAACGAAAGTTCCATCTGATTTAACAAAAGATAAAACAGTCACATATTA	Stephens MA, et al. (1984): S1 DP RG DB
acoR-sspH	sspH	`884908..884949`	`-40:+2`	TAAAGCATACTTCCTTCAGGAAATGGAAACGTTATGTATTGA	Cabrera-Hernandez A, et al. (1999): PE RG
sspI	sspI	`2930688..2930734`	`-43:+4`	AGAACAGCACATAATAAACCAGGTGCAGGGTTAGAATATACGTATTA	Cabrera-Hernandez A & Setlow P (2000): PE
sspI	sspI	`2930667..2930713`	`-43:+4`	ACATGATGTTATTATATCGCAAGAACAGCACATAATAAACCAGGTGC	Cabrera-Hernandez A & Setlow P (2000): PE
sspJ	sspJ	`3420662..3420704`	`-40:+3`	TATCCCGCATAATTTTTCAGGAAAAAGGCATCTTAAACATGTA	Bagyan I, et al. (1998): DB OV PE RG
sspK	sspK	`927648..927694`	`-41:+6`	TAACGCTTTATTACGTGGTGTTCTCCATATACTAACCTTACGTCTTC	Cabrera-Hernandez A & Setlow P (2000): PE
sspL	sspL	`2310004..2310051`	`-39:+9`	AAAAGAATTAAATCTTGATCATTGGTTCATCCTAATGGCGAGGTGAAC	Cabrera-Hernandez A, et al. (1999): PE RG DB OV
sspM	sspM	`2338812..2338858`	`-41:+6`	AAAAATTGTATGATCCTCCTCATTAATGCAAACGATACTTGTGAGGA	Cabrera-Hernandez A & Setlow P (2000): PE
sspN-tlp	sspN	`1929419..1929471`	`-40:+13`	GTATTCATGTTTACCCCTCCTTTTGAGAAACCTATCTGTTGAGGAGGGATAAA	Cabrera-Hernandez A, et al. (1999): PE DB OV RG
sspOP	sspO	`1925666..1925714`	`-41:+8`	GCTCTCTCATATAACACAATAAAAGAAGCCATATTATGATTGAGGTGAT	Cabrera-Hernandez A & Setlow P (2000): PE
ybaK-cwlD	ybaK	`156046..156092`	`-42:+5`	AATTCGGGCATTGTTTCATCATCCAAACCTCAAAATAATCGGTAAAA	Sekiguchi J, et al. (1995): PE NB DB
yckD	yckD	`369270..369334`	`-35:30`	TTATGCATAAAAAATACAAGGCAGCAAAACATATGAAAAATAGGATTGGAGGAATAAAATGGATG	Wang S, et al. (2006): AR, Race-PCR
ydfR	ydfR	`600388..600456`	`-40:+29`	GACAGAATGAACCGACTGCCTTTCGGATATATTAAATTGCGATTGGCCGGAAGAAAAGCCAATCCCATG	Wang S, et al. (2006): AR, Race-PCR
ydfS	ydfS	`600463..600513`	`-37:+14`	CGAACAATATTTTTGGTATAGATGGATATATTAAGCCAAACAATGATAGCA	Wang S, et al. (2006): AR, Race-PCR
yfjS	yfjS	ND	ND	ND	Fukushima T, et al. (2002): RG NB
yfkED	yfkD	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yhcN	yhcN	`988294..988340`	`-40:+7`	TTTGCATGCATAATTAAAGCCAGTTAGAAAAACCTATAAGTAAAGTG	Bagyan I, et al. (1998): PE DB OV RG
yhcQ	yhcQ	`990597..990665`	`-39:+30`	TTCTGCATAATACACGGCAGACTGACACAAAATACAGCTGATCTGAAAAAAAAGGAGGAATTCGGTTTG	Wang S, et al. (2006): AR, Race-PCR
yhcV	yhcV	`996454..996511`	`-39:+19`	CCCTTTTTAAACGGCTCGTGTCTGAACATACTAATGATTGAAAGGGGTGCTGACAATG	Kuwana R, et al. (2002): SDS-PAGE, RG Wang S, et al. (2006): AR, Race-PCR
yisY	yisY	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yitGF	yitG	`1176556..1176618`	`-40:+23`	CGCTGAATAAACGAAGCCATCAGGGACATTCTAAGCAGAAGAAAAGGAGTGTGCTCTGAGATG	Wang S, et al. (2006): AR, Race-PCR
ykvUV	ykvV	`1449888..1449929`	`-33:+9`	AAGGATGATAAAGGAACAGCAGGGGCAAGCTAATTGAAAAGC	Imamura D, et al. (2004): NB PE RG, immunoblot analysis
ylaJ	ylaJ	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yndDEF	yndD	`1906522..1906567`	`-38:+8`	ACGAACATAAAAAATAGGTATACGGGAAAAATAATCCTATTAGAGA	Wang S, et al. (2006): AR, Race-PCR
yoaR	yoaR	`2042047..2042106`	`-40:+20`	AAATACATCAAAGGATAAGCGGCTGTTCATACTAATGATTGGGAGGTAAACCGACTTATG	Wang S, et al. (2006): AR, Race-PCR
yozQ	yozQ	`2027988..2028035`	`-38:+10`	AAGTGCATGAATACCTGCCCAACAGACAGAATAAGAAGAGTTGATATT	Wang S, et al. (2006): AR, Race-PCR
ypzA	ypzA	`2307641..2307694`	`-38:+16`	GGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTG	Wang S, et al. (2006): AR, Race-PCR
yqfSU	yqfS	`2593458..2593502`	`-40:+5`	AGCCTGGGTATAAAAAGAAAATGAGCTATGAGATGGAGAAAATCA	Urtiz-Estrada N, et al. (2003): PE NB RT-PCR
yraGF-adhB-yraED	yraG	`2751966..2752029`	`-39:+25`	TTCTGTATGCTTCAACTTCATTTCGGGAAATGTAACGTTGATAAAAGGAGGTTACATCAATATG	Wang S, et al. (2006): AR, Race-PCR
yrrD	yrrD	`2805408..2805461`	`-39:+15`	CATCGTATGAGTCTAAGGCGCAAAGCAAAACCTAAGCCTGTTCAACAAAAGGTG	Wang S, et al. (2006): AR, Race-PCR
yteA	yteA	`3152987..3153056`	`-38:+32`	TTATGAAAGTTCTCAGGCGATCTGTTCATACTAAAGGTATGCATCACAGAGAAACGAGGCGATCACATTG	Wang S, et al. (2006): AR, Race-PCR
yuzA	yuzA	`3223835..3223907`	`-38:+35`	GCATGTATAGATTCTCCAATATGTCACAATCTATAACTGTTTTAATAATTCATGGAGGAGGTTGCAAAACATG	Wang S, et al. (2006): AR, Race-PCR
yvaB	yvaB	`3445105..3445180`	`-38:+38`	GACAGAATAATCATTATGCATCTGTATGATAATAATTGATGTGTGATTTTTAAAAACGAAAGGGCTGGTAAAAATG	Wang S, et al. (2006): AR, Race-PCR
yvdP	yvdP	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yvdQ	yvdQ	`3541719..3541791`	`-39:+34`	GAAACATAAATGTTCCTCCGCTTGGGCACGTTATGAAATGTGCAATATTGAATATGGGAGGAGAATGAGCATG	Wang S, et al. (2006): AR, Race-PCR
sacB-yveBA	yveA	`3538128..3538172`	`-39:+6`	AGCGGTATTCTCTGTTACATATTGGGCATTGTAAGGAATATAAGG	Wang S, et al. (2006): AR, Race-PCR
ctpB	yvjB	`3622857..3622909`	`-39:+14`	GATTACATGAAATCTCCATCCTTTACATATACTATCTCTAGGTTTTGGTAAAG	Wang S, et al. (2006): AR, Race-PCR
ywhE	ywhE	`3848772..3848817`	`-42:+4`	TTCTGCGATGTTTAAAAACGATCTTTTTTTCTCATAATAGTAGAAA	Pedersen LB, et al. (2000): RG PE
yxeD	yxeD	`4065153..4065227`	`-39:+36`	GACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATG	Wang S, et al. (2006): AR, Race-PCR