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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ggaAB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ggaA | - | 3669065..3670405 | membrane-bound protein | COG0463 | ||
| ggaB | - | 3666239..3668941 | membrane-bound protein | COG1887 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Freymond P-Ph, et al. (2006) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -59:+26 | 3671498..3671582 | TGATGATTTACATTTTTAAAGAGCCTTAACTTTTATAGGAACATATGCTATTATTGTTTATTATTAATGGAACGTAAAAAATATG |
Freymond P-Ph, et al. (2006): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAATGTTGGGAGAAGTTCTGCGAGACTTCTCTTTACTTTTTAAAAG >>>>>>>> <<<<<<<< |
ggaB |
|