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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | glgBCDAP |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| glgB | - | 3168810..3170693 | 1,4-alpha-glucan branching enzyme | COG0296 | ||
| glgC | - | 3167671..3168813 | glucose-1-phosphate adenylyltransferase | COG0448 | ||
| glgD | - | 3166616..3167647 | ADP-glucose pyrophosphorylase | COG0448 | ||
| glgA | - | 3165165..3166619 | starch (bacterial glycogen) synthase | COG0297 | ||
| glgP | - | 3162782..3165178 | glycogen phosphorylase | COG0058 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Kiel JA, et al. (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -39:+4 | 3170702..3170744 | CTTCGAATAAATACTATAAATGAAAACTATGATGTCAGAAAGG |
Hay RE, et al. (1986): S1, dinucleotide priming Kiel JA, et al. (1994): RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCCGCTGTATAAGCGGCTTTTTTTGTTCACAG >>>>>> <<<<<< |
glgP |
|