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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | glnQHMP |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| glnQ | + | 2801585..2802313 | glutamine ABC transporter (ATP-binding protein) | COG1126 | glnQ-BAC-1 glnQ-LAB glnQ-STR | |
| glnH | + | 2802335..2803156 | glutamine ABC transporter (glutamine-binding protein) | COG0834 | glnH-BAC | |
| glnM | + | 2803217..2803867 | glutamine ABC transporter (integral membrane protein) | COG0765 | glnM-BAC | |
| glnP | + | 2803884..2804540 | glutamine ABC transporter (integral membrane protein) | COG0765 | glnM-BAC glnP-LAB glnP-STR-1 glnP-STR-2 |
| Operon evidence: | Northern blotting (3.0 kb transcript) |
|---|---|
| Reference: | Yoshida K, et al. (2003), Genbank Z69371 |
| Comments: | The readthrough terminator downstream of glnH leads to a 1.8 kb transcript. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| TnrA | Positive | ND | 2801106..2801122 | GGGTATATTTTCTGACA |
Yoshida K, et al. (2003): AR HM GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GAAAAGGATACTCTTTGGAGAGTATCCTTTTTGCATTAAAAC >>>>>>>>> <<<<<<<<< |
glnP | |||
| ATCCCGGGATGAGCAGGCGATGCTCATCCCAATTTGATAAGGAGTGA >>>>>>>>>> <<<<<<<<<< |
glnH |
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