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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | gsiB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| gsiB | + | 494061..494432 | general stress protein | COG3729 |
| Operon evidence: | hybrid formation with RNA probes |
|---|---|
| Reference: | Mueller JP, et al. (1992) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | -38:+4 | 493996..494037 | TGTTTGTTTAAAAGAATTGTGAGCGGGAATACAACAACCAAC |
Maul B, et al. (1995): HB PE DB Mueller JP, et al. (1992): PE RG NB Voelker U, et al. (1994): 2D PAGE, HB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCGATCCGGCACATCAGCTGGATCGCTTTTTTTTGGAATCT >>>>>>>>>> <<<<<<<<<< |
gsiB |
|