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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | maeN |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| maeN | yufR | + | 3243814..3245160 | Na+/malate symporter | COG3493 | maeN-BAC |
| Operon evidence: | Northern blotting (1.35 kb transcript); downstream genes are on the opposite strand |
|---|---|
| Reference: | Tanaka K, et al. (2003) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -40:+12 | 3243747..3243798 | TTAAAAAAATATGAAGTGTTAACGCTTTCTTGTAGACTGTAACAAACAATAC |
Tanaka K, et al. (2003): PE |
| YufM | Positive | -86:-23 | 3243711..3243764 | GACCCCCTTAATTTAATTGTTTATTAGTTTTTTAACTTAAAAAAATATGAAGTG |
Tanaka K, et al. (2003): RG NB PE FT |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGAAAGAGTTCCGTTTTATGCGGAACTCTTTTTTTATTTATTC >>>>>>>>> <<<<<<<<< |
maeN |
|