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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | parEC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| parE | grlB | + | 1932686..1934653 | subunit of DNA topoisomerase IV | parE-BAC-2 parE-STA parE-STR | |
| parC | grlA | + | 1934657..1937077 | subunit of DNA topoisomerase IV | COG0188 | parC-STR |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Au N, et al. (2005) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| LexA | Negative | ND | 1932462..1932485 | ATAAACAAACATACGTTCTCATAG |
Au N, et al. (2005): GS AR DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CATACAGAACAATAATAAAAAACCCGCTCATACTATATGAGCGGGTTTCGTTTGTTTTTT >>>>>>>>>> <<<<<<<<<< |
parC |
|