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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | pbpF |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| pbpF | ponA | + | 1083156..1085300 | penicillin-binding protein 2C | COG0744 | pbpF-BAC |
| Operon evidence: | Northern blotting of downstream hemEHY operon |
|---|---|
| Reference: | Hansson M & Hederstedt L (1992) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -49:+16 | 1083039..1083103 | GCCACCTCCTGCTTGCTAGTATATCAAAACAATGGTATAAGTTTCTATTGGCGAGTGCTTCGAAC |
Popham DL, et al. (1993): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAAATTGTTTTCCTCTTAATGGAATTCGGCGATTTTTTGAACTTTGA >>>>>>>>> <<<<<<<<< |
pbpF |
|