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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | prkA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| prkA | + | 972493..974388 | serine protein kinase | COG2766 | prkA-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Fischer C, et al. (1996) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -38:+7 | 972407..972451 | CAAAGCATGTATCACGAGATGGCGGCATAGATTGTATCAAAGTAC |
Eichenberger P, et al. (2003): AR, 5'-RACE-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AACGTGACCCGTCCGAATAGGGCGGGTTATTTTGTCCCATTTTC >>>>>>>>> <<<<<<<<< |
prkA |
|