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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | purA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| purA | - | 4154457..4155749 | adenylosuccinate synthetase | COG0104 | purA-BAC purA-STA purA-STR |
| Operon evidence: | Northern blotting (1.40 kb transcript) |
|---|---|
| Reference: | Mantsala P & Zalkin H (1992), Nickel M, et al. (2004) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PurR | Negative | -88:-35 | 4155828..4155881 | GAATGGAAGCGAACGAATATAGATTTACAATAAATTAATGTTCGGATTTACAAT |
Saxild HH & Nygaard P (1991): Enzyme activity measurement Weng M, et al. (1995): GS Shin BS, et al. (1997): GS FT Rappu P, et al. (1999): RG DP DB Saxild HH, et al. (2001): HM Rappu P, et al. (2005): RG SDM GS |
| SigA | Promoter | -46:+18 | 4155776..4155839 | CGGATTTACAATTGACTTTCTGTTTCTTCACTGATAAACTTGATTTGTTTGAATAGAATCGTTT |
Mantsala P, et al. (1992): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GTCTGCAAGCCCCTATTTAAGGGGCTTGTTTTTTGTTTGAAAG >>>>>>>>> <<<<<<<<< |
purA |
|