Regulated Operon: radC

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
radC ysxA - 2861066..2861761 DNA repair protein COG2003 radC-BAC  

Operon evidence: Genome analysis
Reference:
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
ComK Positive ND 2861985..2862007 AAGACAGAAGTTGCGTTTTGGTC Ogura M, et al. (2002): AR RG HM DB
ComK Positive ND 2861964..2861985 CCCTCAGTGAAGAAGAGATTTG Ogura M, et al. (2002): AR RG HM DB
SigM Promoter ND ND ND Thackray PD, et al. (2003): RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TAGAGTTTATGAGTTTTTCCCTTTAGGGTATTTTTGCTTTAAGAA
                  >>>    <<<
2861009..2861018
48..57
-6.4
 radC

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai