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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | rapB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| rapB | spo0P, ywmE | - | 3770023..3771156 | response regulator aspartate phosphatase | COG0457 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Presecan E, et al. (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | ND | 3771181..3771234 | TTGTAAGAAAATTTAATTCCAAAGCCATACATTATGATAAAATATAACCAATTA |
Jarmer H, et al. (2001): SDM HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAAACCATCTGCTGGCAGATGGTTTTTTTTTATGCAA >>>>>>> <<<<<<< |
rapB |
|