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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | relA-yrvI |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| relA | - | 2819755..2821959 | GTP pyrophosphokinase | COG0317 | relA-BAC relA-STA x0420-CLO | |
| yrvI | - | 2819303..2819701 | x0984-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Wendrich TM & Marahiel MA (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | -40:+4 | 2822029..2822072 | TTTGCATTTATTTTATATAATATTTGGCTATTTGAACTTCTGCT |
Wendrich TM, et al. (1997): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCTGCCAAAAGGCAGCTTTTTTTATTGGAAG >>>>>> <<<<<< |
yrvI |
|