Regulated Operon: relA-yrvI

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
relA
- 2819755..2821959 GTP pyrophosphokinase COG0317 relA-BAC relA-STA x0420-CLO  
yrvI
- 2819303..2819701

x0984-BAC  

Operon evidence: Genome analysis
Reference: Wendrich TM & Marahiel MA (1997)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter -40:+4 2822029..2822072 TTTGCATTTATTTTATATAATATTTGGCTATTTGAACTTCTGCT Wendrich TM, et al. (1997): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCTGCCAAAAGGCAGCTTTTTTTATTGGAAG
     >>>>>>    <<<<<<
2819282..2819297
6..21
-12.2
yrvI

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai