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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sbcD-yirY-yisB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sbcD | yixA | + | 1142882..1144057 | exonuclease SbcD homolog | x1499-BAC x1593-STA | |
| yirY | + | 1144054..1147446 | COG0419 | |||
| yisB | + | 1147460..1147762 | COG1403 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ComK | Positive | ND | ND | ND |
Ogura M, et al. (2002): AR RG DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TGACTAAAAAGCAGCCCTCTCTTTGCAGAGCGGCTGCTTTTATCCGTTTCCA >>>>>>>>>> <<<<<<<<<<< |
yisB |
|