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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sdhCAB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sdhC | - | 2907198..2907806 | succinate dehydrogenase (cytochrome b558 subunit) | COG2009 | sdhC-BAC sdhC-STA | |
| sdhA | citF | - | 2905404..2907164 | succinate dehydrogenase (flavoprotein subunit) | COG1053 | sdhA-BAC-1 sdhA-BAC-3 sdhA-LAB sdhA-STA sdhA-STR |
| sdhB | - | 2904640..2905401 | succinate dehydrogenase (iron-sulfur protein) | COG0479 | sdhB-STR |
| Operon evidence: | Northern blotting (3.45 kb transcript) |
|---|---|
| Reference: | Phillips MK, et al. (1987), Cutting S & Mandelstam J (1986), Melin L, et al. (1987) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -44:+18 | 2907879..2907940 | CGCGTTTTCTTGACGCCCTTTTGAGGGAGGAGTAAAATGAAATTGTCAATAAATCTTAATAA |
Melin L, et al. (1989): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACCTCTTCCGCATGGGAGAGGTTTTTTTAAACAATA >>>>>>>> <<<<<<<< |
sdhB |
|