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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sleB-ypeB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sleB | ypeA | - | 2398349..2399266 | spore cortex-lytic enzyme | COG3773 | sleB-BAC |
| ypeB | joeB, yzuA | - | 2396962..2398314 |
| Operon evidence: | Northern blotting (2.2 kb transcript) |
|---|---|
| Reference: | Moriyama R, et al. (1999), Sorokin A, et al. (1996) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -41:+6 | 2399295..2399341 | AAAGAGTGTATAAAAATAACCTCGTTACAGAAAATACGATTACACTT |
Moriyama R, et al. (1999): NB PE HB DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GGAAAGGACTAAATGTCTTTTCCTTTTTTTCAT >>>> <<<< |
ypeB |
|