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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | smf |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| smf | + | 1681880..1682773 | DNA processing Smf protein homolog | COG0758 | smf-STR |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ComK | Positive | ND | 1681787..1681803 | AAGAACTTGTTCGAAAC |
Ogura M, et al. (2002): AR RG HM DB |
| ComK | Positive | ND | 1681803..1681820 | CTTGTAAAACGCATTAAT |
Ogura M, et al. (2002): AR RG HM DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ACAAACGGTATTGTAATATTTAATAATAGTGAGGATTTAAAGTTGCATATTGTTTTCTATTTAATTA >>>>>>>>>>>>>>>>>>> <<<<<<<<<<<<<<<<<< |
smf |
|