Regulated Operon: spoVG

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
spoVG 0.4 kb gene + 55864..56157
COG2088 spoVG-BAC spoVG-STA  

Operon evidence: Northern blotting (0.4 kb transcript)
Reference: Segall J & Losick R (1977), BSORF
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AbrB Negative -75:-6 55753..55822 TAACTATATCCTATTTTTTCAAAAAATATTTTAAAAACGAGCAGGATTTCAGAAAAAATCGTGGAATTGA Zuber P & Losick R (1983): DB DP RG
Zuber P & Losick R (1987): DB RG RO
Zuber P, et al. (1988): Genetics and biotechnology of Bacilli, vol.2 pp.123-127: DB RG
Furbass R, et al. (1991): GS FT
SigH Promoter -44:+3 55785..55831 AAAAACGAGCAGGATTTCAGAAAAAATCGTGGAATTGATACACTAAT Segall J & Losick R (1977): NB DB
Haldenwang WG & Losick R (1979): RO, RNAP purification
Haldenwang WG & Losick R (1980): In vitro transcription, RNA polymerase-DNA binding assay
Haldenwang WG, et al. (1981): In vitro transcription, RNAP purification
Moran CP, et al. (1981): S1 RO DP dinucleotide-primed transcription
Banner CD, et al. (1983): DP RO
Johnson WC, et al. (1983): RO, RNAP purification
Zuber P & Losick R (1983): S1 RG
Carter HL, et al. (1986): RO, RNAP purification
Lampe M, et al. (1986): RNA Polymerase and the regulation of transcription, pp. 177-183: DB RG
Lampe M, et al. (1986): DB RG
Dubnau E, et al. (1988): immunoblot, Western blot
Zuber P., et al. (1989): SDM RG
Eymann C, et al. (2001): DB NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AGCAAGGACTGCTGAAAGGGCTGACATAAGCCTTTTGCCGGCGGTCCTTTTTTAATTCTGAT
     >>>>>>>>>>>>>>>>>      <<<<<<<<<<<<<<<<<<<
56176..56217
19..60
-28.1
spoVG

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai