Regulated Operon: spoVT

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
spoVT yabL + 64097..64633 transcriptional regulator COG2002 spoVT-BAC  

Operon evidence: insertional mutant
Reference: Bagyan I, et al. (1996), Asai K, et al. (2001)
Comments: An extensive extensive screening for transcripts in the region from rrnO to spo0H by Asai et al. revealed no transcripts containing spoVT and the downstream gene yabM. Transcription of the upstream mfd gene was found to continue into spoVT.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -37:+3 63977..64016 GGTGTATATTACATTTGATGTGACGGATACTAATTTCAAG Bagyan I, et al. (1996): RG DB OV PE
SpoVT Negative ND ND ND Bagyan I, et al. (1996): DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GTAAAGAACAGCTCTCCTTGGGACGCTGTTCTTTTTCATGCGTGCC
     >>>>>>>>>>>   <<<<<<<<<<<<
64668..64693
35..60
-15.2
spoVT

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai