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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sppA-yteJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sppA | yteI | - | 3019079..3020086 | signal peptide peptidase | COG0616 | |
| yteJ | - | 3018572..3019066 | COG1714 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Genbank AF008220, Huang X, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigW | Promoter | -38:+3 | 3020111..3020151 | TGAAGTGAAACATTTTTCATATTGAATCGTATAATGAGAGA |
Huang X, et al. (1999): S1 Cao M, et al. (2002): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GATAACCCGGACTTCCGTCCGGGTTTATTTTTTTAGGA >>>>>>> <<<<<<< |
yteJ |
|