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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sspA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sspA | - | 3024484..3024693 | small acid-soluble spore protein (alpha-type SASP) | sspA-BAC |
| Operon evidence: | Northern blotting (295 bp transcript) |
|---|---|
| Reference: | Connors MJ, et al. (1986) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+12 | 3024699..3024749 | TTCTGAATGAAGCCATGTGTTTTGACACATTCTATACTCACAAGGAGGTGA |
Nicholson WL, et al. (1989): PE RO, nuclease protection |
| SpoVT | Positive | ND | ND | ND |
Bagyan I, et al. (1996): DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTTAGGAGTGGGGGTATCCCCACTCTTTTTCATTTTTTAC >>>>>>>> <<<<<<<< |
sspA |
|