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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sspB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sspB | - | 1049339..1049542 | small acid-soluble spore protein (beta-type SASP) | sspA-BAC |
| Operon evidence: | Northern blotting (0.35 kb transcript) |
|---|---|
| Reference: | Connors MJ, et al. (1986) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -40:+7 | 1049652..1049698 | CTCCGCATGATTTTCCGGCCATTTTAACATAATACGTAGTAACAAGC |
Fajardo-Cavazos P, et al. (1991): PE, promoter mutations, RG Nicholson WL, et al. (1989): PE RO |
| SpoVT | Positive | ND | ND | ND |
Bagyan I, et al. (1996): DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTATAGAGGGCGCGGTTTCCGCGCTCTCTTTATTTTGTCACCC >>>>>>>>>> <<<<<<<<<< |
sspB |
|