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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sspD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sspD | - | 1413108..1413302 | small acid-soluble spore protein (alpha/beta-type SASP) | sspD-BAC |
| Operon evidence: | downstream gene is transcribed in the opposite direction |
|---|---|
| Reference: | Connors MJ, et al. (1986) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+8 | 1413334..1413380 | GCCAGCATAAATAAACCCCGTATATTTCAAACTAAATACGCGTTAAG |
Nicholson WL, et al. (1989): nuclease protection, RO |
| SpoVT | Positive | ND | ND | ND |
Bagyan I, et al. (1996): DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TCTTTATTCGCCGGGGGCACTCGGCGAATCTTCATTTTTAGCTGA >>>>>>>>>> <<<<<<<<<< |
sspD |
|