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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sspI |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sspI | ysfA | + | 2930760..2930975 | small acid-soluble spore protein | sspI-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Cabrera-Hernandez A & Setlow P (2000) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -43:+4 | 2930688..2930734 | AGAACAGCACATAATAAACCAGGTGCAGGGTTAGAATATACGTATTA |
Cabrera-Hernandez A & Setlow P (2000): PE |
| SigG | Promoter | -43:+4 | 2930667..2930713 | ACATGATGTTATTATATCGCAAGAACAGCACATAATAAACCAGGTGC |
Cabrera-Hernandez A & Setlow P (2000): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TGAAACCGGGTGACAGCGCCCGGTTTTTTTCTTATATA >>>>>>> <<<<<<< |
sspI |
|