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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | sspM |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| sspM | + | 2338867..2338971 | small acid-soluble spore protein |
| Operon evidence: | upstream and downstream genes are transcribed in the opposite direction |
|---|---|
| Reference: | Cabrera-Hernandez A & Setlow P (2000) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -41:+6 | 2338812..2338858 | AAAAATTGTATGATCCTCCTCATTAATGCAAACGATACTTGTGAGGA |
Cabrera-Hernandez A & Setlow P (2000): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CGTAAGAAGCAAGGAATTTCCTTGCTTCTTTATTTTTTCAGCC >>>>>>>>>> <<<<<<<<<< |
sspM |
|