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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | tagC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| tagC | dinC | + | 3682468..3683796 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Margot P, et al. (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| LexA | Negative | ND | 3682365..3682388 | AAAACAGAACAAGTGTTCTTTTTT |
Raymond-Denise A & Guillen N (1991): DB RG Cheo DL, et al. (1991): DB RG DP Lovett CM Jr, et al (1993): GS FT Miller MC, et al. (1996): GS FT Winterling KW, et al. (1998): GS Au N, et al. (2005): GS AR DB Groban ES, et al. (2005): GS |
| LexA | Negative | ND | 3682395..3682418 | AATACCGAACGTATGTTTGCTTTA |
Raymond-Denise A & Guillen N (1991): DB RG Cheo DL, et al. (1991): DB RG DP Lovett CM Jr, et al (1993): GS FT Miller MC, et al. (1996): GS FT Winterling KW, et al. (1998): GS Au N, et al. (2005): GS AR DB Groban ES, et al. (2005): GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TCAAATAGGCTGTAGCTATTTAATAGCTACAGCCTATTTGCAACTTTCTAA >>>>>>>>>>>>>> <<<<<<<<<<<<<< |
tagC |
|