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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | tgl |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| tgl | yuxF, yugV | + | 3211630..3212367 | transglutaminase |
| Operon evidence: | Genome analysis; upstream and downstream genes are on the opposite strand |
|---|---|
| Reference: | Oudega B, et al. (1997), Kobayashi K, et al. (1998), Genbank Z93935 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigK | Promoter | -35:+24 | 3211574..3211632 | TAACTTTCATTGCCCAAGCTCTTTGCATATCTTATAAAAAACAAGGGGGGCTAAACATG |
Kobayashi K, et al. (1998): HM Eichenberger P, et al. (2004): Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CATCGTCCGCTAAAAAGCCCCATCGCCTATTTTCCGGACGATGGGGTTTCAAATGCCTTTCG >>>>>>>>>>> <<<<<<<<<<<< |
tgl |
|