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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | uvrBA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| uvrB | dinA, uvrA | - | 3611975..3613960 | excinuclease ABC (subunit B) | COG0556 | uvrB-BAC |
| uvrA | - | 3609094..3611967 | excinuclease ABC (subunit A) | COG0178 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| LexA | Negative | ND | 3614034..3614057 | ACCACCGAACTTTAGTTCGTATTT |
Cheo DL, et al. (1991): DB RG DP Lovett CM Jr, et al (1993): GS Winterling KW, et al. (1998): GS Au N, et al. (2005): GS AR DB Groban ES, et al. (2005): GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GGACAGCTTGTCGGCAAGTCCATCCTTGGGCTTAGCAGGCAAGCTTTTTCTTTACGGCA >>>>>>>>>>>>>>>>> <<<<<<<<<<<<<<<<<< |
uvrA |
|