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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yaaH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yaaH | - | 23866..25149 | COG3858 |
| Operon evidence: | Northern blotting (1.5 kb transcript) |
|---|---|
| Reference: | Kodama T, et al. (1999), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -40:+3 | 25180..25222 | ATAAACATGATCAGCGCTTTTCTTTCATACATTGATAGCGATA |
Kodama T, et al. (1999): NB PE Kobayashi K, et al. (2001): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGACGTTTCGATAATTTGGAAACGTCTTTTTTTCATGGGGG >>>>>>>> <<<<<<<< |
yaaH |
|