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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ybgE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ybgE | + | 259004..260074 | COG0115 | ywaA-BAC |
| Operon evidence: | Northern blotting (1.2 kb transcript) |
|---|---|
| Reference: | Mader U, et al. (2004) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| CodY | Negative | ND | ND | ND |
Molle V, et al. (2003): AR RG, ChIP-on-chip, GS Mader U, et al. (2004): NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAACCTGCCCGGAGGCAGGTTCTTTTTATTTTGAATG >>>>>>>>> <<<<<<<<< |
ybgE |
|