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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ydaTS |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ydaT | - | 492544..492996 | COG4876 | |||
| ydaS | - | 492209..492466 | COG2261 | x0110-BAC-1 x0110-BAC-2 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Petersohn A, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | ND | 493016..493056 | ATGCGTTTTTATTTTTCACCTGCGGGTACCATTTTTATAAA |
Petersohn A, et al. (1999): HB |
| SigB | Promoter | ND | 492488..492529 | AAGTGTTTCGAAATGATCAGGAGCGGTTATTGATTGGTAAAT |
Petersohn A, et al. (1999): HB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAGGAGGCATCGTTTCGAAATGAAACGATGTCTTTTTATATGGGACC >>>>>>>>>>> <<<<<<<<<<< |
ydaS |
|