Regulated Operon: ydaTS

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ydaT
- 492544..492996
COG4876  
ydaS
- 492209..492466
COG2261 x0110-BAC-1 x0110-BAC-2  

Operon evidence: Genome analysis
Reference: Petersohn A, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter ND 493016..493056 ATGCGTTTTTATTTTTCACCTGCGGGTACCATTTTTATAAA Petersohn A, et al. (1999): HB
SigB Promoter ND 492488..492529 AAGTGTTTCGAAATGATCAGGAGCGGTTATTGATTGGTAAAT Petersohn A, et al. (1999): HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CAGGAGGCATCGTTTCGAAATGAAACGATGTCTTTTTATATGGGACC
     >>>>>>>>>>>     <<<<<<<<<<<
492165..492191
18..44
-17.7
ydaS

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai