Regulated Operon: ydgGH

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ydgG
+ 608478..608936
COG1846  
ydgH
+ 608933..611590
COG2409  

Operon evidence: Genome analysis; upstream and doenstream genes are on the opposite strand
Reference: Au N, et al. (2005)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
LexA Negative ND 608346..608369 ATACACGAACATGAGTTCTTATGT Au N, et al. (2005): GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGAGAGAAGAGTGATGAATGGTCATCACTCTTTTTTCATGACTAA
        >>>>>>>>>    <<<<<<<<<
611600..611621
10..31
-15.3
ydgH

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai