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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yfhS |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yfhS | - | 936108..936332 | yfhS-BAC |
| Operon evidence: | Northern blotting (0.3 kb transcript) |
|---|---|
| Reference: | Yamamoto H, et al. (1999), BSORF |
| Comments: | The promoter upstream of yfhS may be recognized by SigG instead of SigE. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -38:+11 | 936348..936396 | TAGCGTATAGTTCTTTTATTTCCACAAACAATAATGGCAAGAACTTTAA |
Yamamoto H, et al. (1999): PE NB DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGCAATGAGCTGTTCACGCTCAGTTTTGATCCCTTTTT >>>>> <<<<< |
yfhS |
|