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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yhcL |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yhcL | tcyP | + | 986322..987713 | COG1823 | yhcL-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -53:+13 | 986242..986307 | GTTAAAATAATTCGCACTTGACCCATCGGAATTAGTGTAATATAGTAAATGAGAAAATTTGAAGGG |
Auger S (2003): Thesis: PE Even S, et al. (2006): PE |
| YrzC | Negative | -60:+1 | 986235..986295 | TTGATAAGTTAAAATAATTCGCACTTGACCCATCGGAATTAGTGTAATATAGTAAATGAGA |
Auger S (2003): Unpublished: GS HM Even S, et al. (2006): GS HM AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GTAACATATGAAAACGTGTAATCCAAGAGGATTACACGTTTTTTTAACGGCCA >>>>>>>>>> <<<<<<<<<< |
yhcL |
|