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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yjcIJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yjcI | metI | + | 1257804..1258925 | COG0626 | yjcI-BAC yjcI-BAC | |
| yjcJ | metC | + | 1258918..1260090 | COG0626 |
| Operon evidence: | Northern blotting (2.5 kb transcript) |
|---|---|
| Reference: | Auger S, et al. (2002) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -40:+7 | 1257554..1257600 | AAGTGTTGAAATAAACTGTGAATTGCGCTAATATAAAACAATCAGAA |
Auger S, et al. (2002): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAAGCCGGGGATAGTCCGGCTTCTTTTATTATTGTTCG >>>>>>>>> <<<<<<<<< |
yjcJ |
|