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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ykuD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ykuD | - | 1475819..1476313 | COG1376 |
| Operon evidence: | Northern blotting (0.9 kb transcript) |
|---|---|
| Reference: | Kodama T, et al. (2000) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigK | Promoter | -38:+23 | 1476311..1476371 | AATGTAGCAGGATGGGCTCCTCATCAATACTTATAAGTAAAAAAGGAGGATGAGGAAACTG |
Eichenberger P, et al. (2004): Race-PCR Kodama T, et al. (2000): NB DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TCACGATTAACCGGTAATGTTTTCTTATTTGTTT >>>> <<<< |
ykuD |
|