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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yndL |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yndL | + | 1914430..1915188 | COG4195 |
| Operon evidence: | Northern blotting (transcript longer than 622 nt) |
|---|---|
| Reference: | Silvaggi JM, et al. (2006) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigK | Promoter | -43:+9 | 1914290..1914341 | AAAATGAGAAGAACAGCGCCCGGGCTAATGGTATATAATATTGTGAATTTAA |
Silvaggi JM, et al. (2006): PE NB DB Eichenberger P, et al. (2004): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGCTACTGAAAAATAGGAGGCGATAAGACAGCCTCCTATTCCTTATGCTTCTCTTTC >>>>>>>>>> <<<<<<<<<< |
yndL |
|