Regulated Operon: yoaN

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yoaN oxdD - 2036810..2037988
COG2140  

Operon evidence: Northern blotting (1.2 kb transcript)
Reference: Costa T, et al. (2004), Genbank AF027868
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
GerE Negative ND ND ND Costa T, et al. (2004): NB SDS-PAGE RG, GFP localization
SigK Promoter -37:+15 2038004..2038055 TAGGCACAGCAATCTAAGATTCTGCATAGGCTGAAATAAAATCTTGTTCATT Costa T, et al. (2004): NB RG HM
Eichenberger P, et al. (2004): Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TAAATCCCTATATATACGTTATGTAGGGTTTTTCTGCTTGAAT
     >>>>>>>>>     <<<<<<<<<
2036707..2036729
81..103
-11.1
yoaN

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai