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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yoaN |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yoaN | oxdD | - | 2036810..2037988 | COG2140 |
| Operon evidence: | Northern blotting (1.2 kb transcript) |
|---|---|
| Reference: | Costa T, et al. (2004), Genbank AF027868 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| GerE | Negative | ND | ND | ND |
Costa T, et al. (2004): NB SDS-PAGE RG, GFP localization |
| SigK | Promoter | -37:+15 | 2038004..2038055 | TAGGCACAGCAATCTAAGATTCTGCATAGGCTGAAATAAAATCTTGTTCATT |
Costa T, et al. (2004): NB RG HM Eichenberger P, et al. (2004): Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAAATCCCTATATATACGTTATGTAGGGTTTTTCTGCTTGAAT >>>>>>>>> <<<<<<<<< |
yoaN |
|